@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2401: (2016-04-03 )
LKNYKAYLIDLDGTMYRGAEVIPEAIIFIENLKRAGLPYLFVTNNSTKTPGQVAEHLTDMGIQAVSDDVFTTSQATVQFMMEQKREKTVYVIGERGIKQELTDNGFEITSSNPAFVVVGLDREVDYEKFSKAALAVRGGAMFISTNGDAAIPTERGLLPGNGSITSVVSVATETAPIFIGKPESIIMEQALAKLGVHKDEAIMVGDNYETDIMAGINYGMDTLIVHTGFTSKEALLTKEIQPTYAVTKLTDWEFN

Atome Classification :

(20 SA) .........10........20........30........40........50......-.-.-60........70.........80..-......90........100.......110-....-.....120.......130.....-..-140.......150-.-.-.....160.-.......170....-...180.......190.......200.....-..210.......220.......230-...----....240........250...
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) LKNYKAYLIDLDGTMYRGAEVIPEAIIFIENLKRAGLPYLFVTNNSTKTPGQVAEHL-T-D-MGIQAVSDDVF-TTSQATVQFMMEQ-KREKTVYVIGERGIKQELTDNGFEITS---SNPA-FVVVGLDREVDYEKFSKAALAVR-GG-AMFISTNGDAAIP-T-E-RGLLPG-NG-SITSVVSVATETAP-IFIGKPESIIMEQALAKLGVHKDEAIMVGDN-YETDIMAGINYGMDTLIVHTGFTSK-EAL----LTKEI-QPTYAVTKLTDWEFN
4 PsiBlast_PDB 94.5853% -98 - C1 -4IFT - ? A:[13-266] MRKYNGYLIDLDGTMYRGTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKL-V-S-LDIPATPEQIF-TSSMATANYVYDL-DQNAMIYFIGEEGLYKALKEKGFSFAD---ENAD-VVIVGLDREVTYEKLAVACLAVR-NG-AKLISTNGDLVLP-T-E-RGLMPG-NG-AFTALISHSTQVKA-TFVGKPEPIIMEQALKVLGTNKNETIMVGDN-YDTDILAGIRAGLDTLLVHTGVTTV-EKL----KEYKQ-QPTYSMKSLDDWKF-
8 PsiBlast_PDB 93.6550%-106 - C1 -1WVI - ? A:[1003-1254] ---YKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLAT-S-FNIKTPLETIY-TATLATIDYMNDM-KRGKTAYVIGETGLKKAVAEAGYREDS---ENPA-YVVVGLDTNLTYEKLTLATLAIQ-KG-AVFIGTNPDLNIP-T-E-RGLLPG-AG-AILFLLEKATRVKP-IIIGKPEAVIMNKALDRLGVKRHEAIMVGDN-YLTDITAGIKNDIATLLVTTGFTKP-EEV----PALPI-QPDFVLSSLAEWDF-
22 PsiBlast_CBE 93.4452%-103 - C1 -1YV9 ? B:[4-256] --DYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLAN-E-FDIHVPASLVY-TATLATIDYMKEA-NRGKKVFVIGEAGLIDLILEAGFEWDE---TNPD-YVVVGLDTELSYEKVVLATLAIQ-KG-ALFIGTNPDKNIP-T-E-RGLLPG-AG-SVVTFVETATQTKP-VYIGKPKAIIMERAIAHLGVEKEQVIMVGDN-YETDIQSGIQNGIDSLLVTSGFTPK-SAV----PTLPT-PPTYVVDSLDEWTF-
5 PsiBlast_PDB 93.2450%-106 - C1 -3EPR ? A:[5-256] ---YKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEML-R-G-FNVETPLETIY-TATMATVDYMNDM-NRGKTAYVIGEEGLKKAIADAGYVEDT---KNPA-YVVVGLDWNVTYDKLATATLAIQ-NG-ALFIGTNPDLNIP-T-E-RGLLPG-AG-SLNALLEAATRIKP-VFIGKPNAIIMNKALEILNIPRNQAVMVGDN-YLTDIMAGINNDIDTLLVTTGFTTV-EEV----PDLPI-QPSYVLASLDEWTFN
1 PsiBlast_PDB 93.0960% -98 - C1 -3PDW YUTF_BACSU A:[3-254] LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKL-V-S-FDIPATEEQVF-TTSMATAQHIAQQ-KKDASVYVIGEEGIRQAIEENGLTFGG---ENAD-FVVVGIDRSITYEKFAVGCLAIR-NG-ARFISTNGDIAIP-T-E-RGLLPG-NG-SLTSVLTVSTGVQP-VFIGKPESIIMEQAMRVLGTDVSETLMVGDN-YATDIMAGINAGMDTLLVHTG-------M----TDDME-KPTHAIDSLTEW---
3 PsiBlast_PDB 92.8953%-100 - C1 -4KN8 - ? A:[13-266] MRKYNGYLIDLDGTMYRGTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKL-V-S-LDIPATPEQIF-TSSMATANYVYDL-DQNAMIYFIGEEGLYKALKEKGFSFAD---ENAD-VVIVGLDREVTYEKLAVACLAVR-NG-AKLISTNGDLALP-T-E-RGFMPG-NG-AFTALISHSTQVKA-TFVGKPEPIIMEQALKVLGTNKNETIMVGDN-YDTDILAGIRAGLDTLLVHTGVTTV-EKL----KEYKQ-QPTYSMKSLDDWKF-
2 PsiBlast_PDB 92.8753% -98 - C1 -4IG4 - ? A:[13-266] MRKYNGYLIDLDGTMYRGTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKL-V-S-LDIPATPEQIF-TSSMATANYVYDL-DQSAMIYFIGEEGLYKALKEKGFSFAD---ENAD-VVIVGLDREVTYEKLAVACLAVR-NG-AKLISTNGDLALP-T-E-RGFMPG-NG-AFTALISHSTQVKA-TFVGKPEPIIMEQALKVLGTNKNETIMVGDN-YDTDILAGIRAGLDTLLVHTGVTTV-EKL----KEYKQ-QPTYSMKSLDDWKF-
21 PsiBlast_CBE 91.6953%-101 - C1 -4O8C ? B:[7-260] MRKYNGYLIDLDGTMYRGTERIDAASGFIKELNRLHIPYLFVTNNSTRTPEQVADKL-V-S-LDIPATPEQIF-TSSMATANYVYDL-DQNAMIYFIGEEGLYKALKEKGFSFAD---ENAD-VVIVGLDREVTYEKLAVACLAVR-NG-AKLISTNGDLALP-T-E-RGFMPG-NG-AFTALISYSTQVKA-TFVGKPEPIIMEQALKVLGTNKNETIMVGDN-YDTDILAGIRAGLDTLLVHTGVTTV-EKL----KEYKQ-QPTYSMKSLDDWKF-
44 HHSearch 91.2259% -96 - C1 -3PDW YUTF_BACSU A:[3-256] LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKL-V-S-FDIPATEEQVF-TTSMATAQHIAQQ-KKDASVYVIGEEGIRQAIEENGLTFGG---ENAD-FVVVGIDRSITYEKFAVGCLAIR-NG-ARFISTNGDIAIPTE-R--GLLPG-NG-SLTSVLTVSTGVQP-VFIGKPESIIMEQAMRVLGTDVSETLMVGDN-YATDIMAGINAGMDTLLVHTG-------M----TDDME-KPTHAIDSLTEWIP-
7 PsiBlast_PDB 90.3450%-100 - C1 -1YDF ? A:[3-255] ---YKGYLIDLDGTIYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEML-AQN-FNIDTPLSTVY-TATLATIDYMNDL-GLEKTVYVVGEAGLKEAIKAAGYVEDK---EKPA-YVVVGLDWQVDYEKFATATLAIQ-KG-AHFIGTNPDLNIP-T-E-RGLLPG-AG-SLITLLEVATRVKP-VYIGKPNAIIMDKAVEHLGLEREELIMVGDN-YLTDIRAGIDNGIPTLLVTTGFTKA-EEV----AGLPI-APTHVVSSLAEWDFD
9 PsiBlast_PDB 89.8747%-103 - C1 -1YS9 - ? A:[3-254] ---YKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSML-A-NQFHVETSIETIY-TATMATVDYMNDM-NRGKTAYVIGETGLKSAIAAAGYVEEL---ENPA-YVVVGLDSQVTYEMLAIATLAIQ-KG-ALFIGTNPDLNIP-T-E-RGLMPG-AG-ALNALLEAATRVKP-VFIGKPNAIIMNKSLEVLGIQRSEAVMVGDN-YLTDIMAGIQNDIATILVTTGFTRP-EEV----PTLPI-QPDHVLSSLDEWRL-
6 PsiBlast_PDB 88.1352% -97 - C1 -1YV9 ? A:[4-256] --DYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLAN-E-FDIHVPASLVY-TATLATIDYMKEA-NRGKKVFVIGEAGLIDLILEAGFEWDE---TNPD-YVVVGLDTELSYEKVVLATLAIQ-KG-ALFIGTNPDKNIP-T-E-RGLLPG-AG-SVVTFVETATQTKP-VYIGKPKAIIMERAIAHLGVEKEQVIMVGDN-YETDIQSGIQNGIDSLLVTSGFTPK-SAV----PTLPT-PPTYVVDSLDEWTF-
45 HHSearch 87.2346% -98 * C1 *3EPR ? A:[2-256] SLAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEML-R-G-FNVETPLETIY-TATMATVDYMNDM-NRGKTAYVIGEEGLKKAIADAGYVEDT---KNPA-YVVVGLDWNVTYDKLATATLAI--QNGALFIGTNPDLNIPTERG-LLPGAGSLN-ALLEAATRI---KP-VFIGKPNAIIMNKALEILNIPRNQAVMVGDN-YLTDIMAGINNDIDTLLVTTGFTTV-EEV----PDLPI-QPSYVLASLDEWTFN
11 PsiBlast_PDB 81.8933% -96 - C1 -4JDP ? A:[24-280] MPDKKGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERL-R-S-FGLEVGEDEIL-VATYATARFIARE-KPNAKVFTTGEEGLIEELRLAGLEIVD---YDEAEYLVVGSNRKINFELMTKALRACL-RG-IRYIATNPDRIFP-A-E-DGPIPG-TG-MIIGALYWMTGREPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQ-IDVDVAAGKAIGAETVLVLTGVTTR-ENLDQMIERHGL-KPDYVFNSLKD----
24 PsiBlast_CBE 81.4433% -96 - C1 -4JDP ? B:[24-280] MPDKKGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERL-R-S-FGLEVGEDEIL-VATYATARFIARE-KPNAKVFTTGEEGLIEELRLAGLEIVD---YDEAEYLVVGSNRKINFELMTKALRACL-RG-IRYIATNPDRIFP-A-E-DGPIPG-TG-MIIGALYWMTGREPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQ-IDVDVAAGKAIGAETVLVLTGVTTR-ENLDQMIERHGL-KPDYVFNSLKD----
13 PsiBlast_PDB 81.1032% -95 - C1 -3QGM ? A:[7-261] --DKKGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERL-R-S-FGLEVGEDEIL-VATYATARFIARE-KPNAKVFTTGEEGLIEELRLAGLEIVD---YDEAEYLVVGSNRKINFELMTKALRACL-RG-IRYIATNPDRIFP-A-E-DGPIPG-TG-MIIGALYWMTGREPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQ-IDVDVAAGKAIGAETVLVLTGVTTR-ENLDQMIERHGL-KPDYVFNSLKD----
12 PsiBlast_PDB 79.1034% -96 - C1 -2C4N NAGD_ECOLI A:[4-239] ----KNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRF-A-T-AGVD-VPDSVFYTSAMATADFLRRQ-EGKKA-YVVGEGALIHELYKAGFTITD---VNPD-FVIVGETRSYNWDMMHKAAYFVA-NG-ARFIATNPDT----H-G-RGFYPA-CG-ALCAGIEKISGRKP-FYVGKPSPWIIRAALNKMQAHSEETVIVGDN-LRTDILAGFQAGLETILVLSGVSSL-DDI----DSMPF-RPSW-----------
48 HHSearch 78.0845% -90 - C1 -1YV9 ? A:[2-256] SLDYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL-A-NEFDIHVPASLVY-TATLATIDYMKEA-NRGKKVFVIGEAGLIDLILEAGFEWDE---TNPD-YVVVGLDTELSY--EKVVLATLAIQKGALFIGTNPDKNIPTE-RGLLPGAG-SVVTFVETATQ---TKP-VYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYE-TDIQSGIQNGIDSLLVTSGFTPK-SAV----PTLPT-PPTYVVDSLDEWTF-
52 HHSearch 77.7231% -90 - C1 -1VJR - ? A:[14-268] LDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKL-R-N-MGVDVPDDAVV-TSGEITAEHMLKR-FGRCRIFLLGTPQLKKVFEAYGHVIDE---ENPD-FVVLGFDKTLTYERLKKACILLR-KG-KFYIATHPDINCPSK-E--GPVPD-AG-SIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDR-LYTDVKLGKNAGIVSILVLTGETTP-EDL----ERAET-KPDFVFKNLGELAK-
14 PsiBlast_PDB 77.6833% -89 - C1 -4I9F ? A:[14-264] -QEHDCLLIDLDGTVFCGRQPTGGAV---QSLSQVRSRKLFVTNNASRSADEVAAHL-C-E-LGFTATGEDVV-TSAQSAAHLLAGQLAPGARVLIVGTEALANEVAAVGLRPVRRFEDRPD-AVVQGLSMTTGWSDLAEAALAIR-AG-ALWVAANVDPTLP-T-E-RGLLPG-NG-SMVAALRTATGMDP-RVAGKPAPALMTEAVARGDFRA--ALVVGDR-LDTDIEGANAAGLPSLMVLTGVNSAWDAV----YAEPVRRPTY-----------