@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0538: (2016-03-16 )
MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA

Atome Classification :

(58 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FCF_A_2(3FCF)
UNG_HUMAN
[Raw transfer]




3FL_B_8(3FCL)
UNG_HUMAN
[Raw transfer]




3FI_A_2(3FCI)
UNG_HUMAN
[Raw transfer]




3FI_A_2(3FCI)
UNG_HUMAN
[Raw transfer]




5NU_A_2(4WS5)
?
[Raw transfer]




GOL_B_5(1OKB)
?
[Raw transfer]




302_B_2(2HXM)
UNG_HUMAN
[Raw transfer]




3FL_A_3(3FCL)
UNG_HUMAN
[Raw transfer]




GOL_A_3(1OKB)
?
[Raw transfer]




URA_B_2(5EUG)
UNG_ECOLI
[Raw transfer]




GOL_B_2(3EUG)
UNG_ECOLI
[Raw transfer]




URA_B_2(2EUG)
UNG_ECOLI
[Raw transfer]




URA_A_2(4WRU)
?
[Raw transfer]




URA_A_2(4WPL)
?
[Raw transfer]




GOL_A_8(4WRW)
?
[Raw transfer]




URA_A_2(4WRV)
?
[Raw transfer]




URF_A_2(4WS1)
?
[Raw transfer]




URF_A_2(4WS0)
?
[Raw transfer]




URA_D_4(1UDH)
UNG_HHV11
[Raw transfer]




DUR_A_2(2C53)
UNG_HHV11
[Raw transfer]




5UC_A_2(4WS7)
?
[Raw transfer]




6UA_A_2(4WS3)
?
[Raw transfer]




FCK_B_2(3FCK)
UNG_HUMAN
[Raw transfer]




URA_B_2(1FLZ)
UNG_ECOLI
[Raw transfer]




URB_A_3(3CXM)
?
[Raw transfer]




URB_A_3(3CXM)
?
[Raw transfer]




TUL_A_2(4WS8)
?
[Raw transfer]




EDO_A_5(4WS0)
?
[Raw transfer]




CIT_A_2(4WRY)
?
[Raw transfer]




CIT_A_3(4WS4)
?
[Raw transfer]




CIT_A_2(4WPK)
?
[Raw transfer]




NACID_C_3(4UQM)
?
[Raw transfer]

-

CIT_A_3(4WS2)
?
[Raw transfer]




CIT_A_4(4WS6)
?
[Raw transfer]




FLC_A_2(3A7N)
UNG_MYCTU
[Raw transfer]




CIT_A_2(4WRZ)
?
[Raw transfer]




NACID_D_1(1LAU)
UNG_HHV11
[Raw transfer]

-

DMS_A_5(4WPL)
?
[Raw transfer]




NACID_C_2(2OXM)
UNG_HUMAN
[Raw transfer]

-

NACID_C_2(1EMH)
UNG_HUMAN
[Raw transfer]

-

URE_D_6(2J8X)
UNG_EBVB9
[Raw transfer]




NACID_C_2(1Q3F)
UNG_HUMAN
[Raw transfer]

-

NACID_B_2(1SSP)
UNG_HUMAN
[Raw transfer]

-

CHAIN_C_3(3UF7)
UNG_ECOLI
[Raw transfer]

-

NACID_C_2(1EMJ)
UNG_HUMAN
[Raw transfer]

-

CHAIN_C_2(2OYT)
UNG_HUMAN
[Raw transfer]

-

NACID_B_2(2SSP)
UNG_HUMAN
[Raw transfer]

-

NACID_B_2(4SKN)
UNG_HUMAN
[Raw transfer]

-

NACID_B_1(1Q3F)
UNG_HUMAN
[Raw transfer]

-

NACID_B_1(2OXM)
UNG_HUMAN
[Raw transfer]

-

CHAIN_C_3(3UF7)
UNG_ECOLI
[Raw transfer]

-

URE_B_5(2J8X)
UNG_EBVB9
[Raw transfer]




URE_B_5(2J8X)
UNG_EBVB9
[Raw transfer]




2 PsiBlast_PDB 98.9199%-111 - C8 -3WDG - UNG_STAAR -
78 HHSearch 98.53100%-110 - C8 -3WDF - UNG_STAAR -
1 PsiBlast_PDB 98.3099%-110 - C8 -3WDF - UNG_STAAR -
5 PsiBlast_PDB 85.9549%-107 - C8 -2JHQ - UNG_VIBCH -
3 PsiBlast_PDB 85.4253%-110 - C8 -3ZOQ - UNG_BACSU -
4 PsiBlast_PDB 84.3153%-107 - C8 -3ZOR - UNG_BACSU -
79 HHSearch 83.0046% -98 * C8 *3FCI 5.4 UNG_HUMAN
6 PsiBlast_PDB 82.8449%-104 - C8 -2EUG 3.3 UNG_ECOLI
7 PsiBlast_PDB 82.8149%-105 - C8 -3EUG 2.6 UNG_ECOLI
28 PsiBlast_CBE 82.3848%-101 - C8 -3FCI 5.4 UNG_HUMAN
39 PsiBlast_CBE 82.1644%-107 - C8 -3CXM 3.3 ?
10 PsiBlast_PDB 82.0254%-108 - C8 -2BOO - UNG_DEIRA -
23 PsiBlast_CBE 81.7554%-100 - C8 -1OKB 3.2 ?
9 PsiBlast_PDB 81.6654%-109 - C8 -3UFM - UNG_DEIRA -
22 PsiBlast_CBE 81.6254%-100 - C8 -1OKB 3.1 ?
27 PsiBlast_CBE 81.4848%-101 - C8 -3FCK 4.4 UNG_HUMAN
36 PsiBlast_CBE 81.4248%-102 - C8 -1EMH 4.0 UNG_HUMAN
80 HHSearch 81.3848%-101 - C8 -3UF7 5.5 UNG_ECOLI
77 HHSearch 81.2949% -96 - C8 -3TR7 - UNG_COXBU -
26 PsiBlast_CBE 81.2748% -96 - C8 -3FCL 5.5 UNG_HUMAN
29 PsiBlast_CBE 81.2448% -97 - C8 -3FCF 5.1 UNG_HUMAN
32 PsiBlast_CBE 81.1548% -96 - C8 -2HXM 5.2 UNG_HUMAN
33 PsiBlast_CBE 80.7748% -98 - C8 -1SSP 2.5 UNG_HUMAN
25 PsiBlast_CBE 80.7548% -95 - C8 -3FCL 5.8 UNG_HUMAN
11 PsiBlast_PDB 80.5654%-108 - C8 -3UF7 5.5 UNG_ECOLI
34 PsiBlast_CBE 80.3348% -97 - C8 -1Q3F 8.7 UNG_HUMAN
35 PsiBlast_CBE 80.0048%-100 - C8 -1EMJ 2.3 UNG_HUMAN
8 PsiBlast_PDB 79.9849%-100 - C8 -1FLZ 3.6 UNG_ECOLI
19 PsiBlast_PDB 79.7753% -97 - C8 -4UQM 2.6 ?
31 PsiBlast_CBE 79.6848% -97 - C8 -2OXM 6.7 UNG_HUMAN
82 HHSearch 79.4844%-100 - C8 -3CXM 3.3 ?
30 PsiBlast_CBE 79.3448% -98 - C8 -2OYT 2.6 UNG_HUMAN
37 PsiBlast_CBE 79.3148% -96 - C8 -2SSP 2.3 UNG_HUMAN
21 PsiBlast_CBE 79.0053%-107 - C8 -5EUG 3.3 UNG_ECOLI
38 PsiBlast_CBE 78.6647% -95 - C8 -4SKN 3.8 UNG_HUMAN
83 HHSearch 77.5340% -89 - C8 -2J8X 1.6 UNG_EBVB9
63 PsiBlast_CBE 76.6543% -97 - C8 -2J8X 2.3 UNG_EBVB9
62 PsiBlast_CBE 76.3843%-106 - C8 -3A7N 2.5 UNG_MYCTU
60 PsiBlast_CBE 76.2143%-107 - C8 -4WPL 3.5 ?
45 PsiBlast_CBE 75.9143%-106 - C8 -4WS8 3.1 ?
48 PsiBlast_CBE 75.8343%-111 - C8 -4WS5 3.9 ?
42 PsiBlast_CBE 75.5743% -89 - C8 -1UDH 3.5 UNG_HHV11
64 PsiBlast_CBE 75.3143% -97 - C8 -2J8X 1.6 UNG_EBVB9
59 PsiBlast_CBE 75.2843%-103 - C8 -4WRU 3.5 ?
58 PsiBlast_CBE 75.2443%-103 - C8 -4WRV 3.4 ?
47 PsiBlast_CBE 75.0843%-105 - C8 -4WS6 1.7 ?
44 PsiBlast_CBE 75.0643% -95 - C8 -1LAU 5.8 UNG_HHV11
50 PsiBlast_CBE 75.0043%-106 - C8 -4WS3 3.6 ?
54 PsiBlast_CBE 74.9443%-107 - C8 -4WRZ 2.1 ?
66 PsiBlast_CBE 74.8742% -95 - C8 -2C53 3.9 UNG_HHV11
61 PsiBlast_CBE 74.8743%-106 - C8 -4WPK 2.2 ?
49 PsiBlast_CBE 74.8443%-104 - C8 -4WS4 2.3 ?
51 PsiBlast_CBE 74.7443%-106 - C8 -4WS2 3.3 ?
52 PsiBlast_CBE 74.5443%-100 - C8 -4WS1 3.3 ?
53 PsiBlast_CBE 74.5143%-100 - C8 -4WS0 3.2 ?
57 PsiBlast_CBE 74.3343%-101 - C8 -4WRW 2.5 ?
46 PsiBlast_CBE 74.3043%-101 - C8 -4WS7 3.3 ?
55 PsiBlast_CBE 74.0043%-102 - C8 -4WRY 3.3 ?