@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1397: (2016-03-25 )
MSYQPHYFQEVRKAQQESYSPYSQFKVGAYLKTKDGRTFYGTNVENASYPLSICAERASLVSAISQGYRPGDFESITVTVDADKPSSPCGACRQVLKELCDDDMPVYMTNHKGDMVMMTVAELLPFGFSGKDLE

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TYU_D_13(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_B_11(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_C_12(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_A_10(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_A_10(2FR5)
CDD_MOUSE
[Raw transfer]




URI_B_11(2FR6)
CDD_MOUSE
[Raw transfer]




THU_B_5(1UWZ)
CDD_BACSU
[Raw transfer]




THU_A_3(1UWZ)
CDD_BACSU
[Raw transfer]




THU_B_8(1UX1)
CDD_BACSU
[Raw transfer]




THU_B_6(1JTK)
CDD_BACSU
[Raw transfer]




CTN_D_13(2FR6)
CDD_MOUSE
[Raw transfer]




CTN_C_12(2FR6)
CDD_MOUSE
[Raw transfer]




THU_A_5(1UX1)
CDD_BACSU
[Raw transfer]




THU_A_5(1JTK)
CDD_BACSU
[Raw transfer]




THU_D_12(1UX1)
CDD_BACSU
[Raw transfer]




THU_C_10(1UX1)
CDD_BACSU
[Raw transfer]




THU_B_5(1UX0)
CDD_BACSU
[Raw transfer]




URD_D_13(1ZAB)
CDD_MOUSE
[Raw transfer]




URD_A_10(1ZAB)
CDD_MOUSE
[Raw transfer]




URD_C_12(1ZAB)
CDD_MOUSE
[Raw transfer]




BRD_B_6(1MQ0)
CDD_HUMAN
[Raw transfer]




URD_B_11(1ZAB)
CDD_MOUSE
[Raw transfer]




EDO_D_12(3R2N)
?
[Raw transfer]




EDO_B_8(3R2N)
?
[Raw transfer]




EDO_A_6(3R2N)
?
[Raw transfer]




MRD_D_13(3DMO)
?
[Raw transfer]




EDO_A_6(3R2N)
?
[Raw transfer]




MRD_A_10(3DMO)
?
[Raw transfer]




MRD_A_10(3DMO)
?
[Raw transfer]




MRD_B_11(3DMO)
?
[Raw transfer]




MRD_C_12(3DMO)
?
[Raw transfer]




EDO_C_10(3R2N)
?
[Raw transfer]




NH3_B_14(2FR6)
CDD_MOUSE
[Raw transfer]




32 PsiBlast_CBE 92.9247% -83 - C5 -1ZAB 3.2 CDD_MOUSE
33 PsiBlast_CBE 92.7147% -82 - C5 -1ZAB 3.7 CDD_MOUSE
8 PsiBlast_PDB 92.5047% -80 - C5 -2FR6 - CDD_MOUSE -
26 PsiBlast_CBE 92.1547% -78 - C5 -2FR6 3.4 CDD_MOUSE
30 PsiBlast_CBE 92.1247% -80 - C5 -2FR5 3.7 CDD_MOUSE
27 PsiBlast_CBE 92.0247% -81 - C5 -2FR6 3.7 CDD_MOUSE
63 HHSearch 91.9847% -78 - C5 -1UWZ 3.4 CDD_BACSU
24 PsiBlast_CBE 91.0647% -81 - C5 -1UWZ 3.5 CDD_BACSU
34 PsiBlast_CBE 90.4647% -80 - C5 -1ZAB 3.6 CDD_MOUSE
28 PsiBlast_CBE 90.2447% -79 - C5 -2FR6 3.9 CDD_MOUSE
4 PsiBlast_PDB 89.9747% -81 - C5 -1UWZ - CDD_BACSU -
6 PsiBlast_PDB 89.6947% -80 - C5 -1ZAB 3.4 CDD_MOUSE
2 PsiBlast_PDB 89.6348% -81 - C5 -1JTK - CDD_BACSU -
7 PsiBlast_PDB 89.4347% -81 - C5 -2FR5 3.9 CDD_MOUSE
65 HHSearch 89.0148% -81 - C5 -2FR5 3.9 CDD_MOUSE
64 HHSearch 88.6046% -80 - C5 -3DMO 3.1 ?
22 PsiBlast_CBE 88.4048% -81 - C5 -1JTK 3.6 CDD_BACSU
21 PsiBlast_CBE 88.2848% -92 - C5 -2D30 - ? -
79 Fugue 88.1946% -76 - C5 -1JTK 3.6 CDD_BACSU
61 HHSearch 87.9248% -83 * C5 *2D30 - ? -
31 PsiBlast_CBE 87.7547% -78 - C5 -2FR5 3.8 CDD_MOUSE
35 PsiBlast_CBE 87.5852%-109 - C5 -3DMO 3.0 ?
29 PsiBlast_CBE 87.0947% -79 - C5 -2FR5 3.9 CDD_MOUSE
37 PsiBlast_CBE 86.2652%-105 - C5 -3DMO 2.9 ?
9 PsiBlast_PDB 86.2152%-109 - C5 -3DMO 3.1 ?
25 PsiBlast_CBE 85.6950% -70 - C5 -1MQ0 3.6 CDD_HUMAN
23 PsiBlast_CBE 85.6947% -79 - C5 -1UX0 3.7 CDD_BACSU
36 PsiBlast_CBE 85.3352%-107 - C5 -3DMO 2.9 ?
40 PsiBlast_CBE 84.1848% -81 - C5 -1UX1 3.7 CDD_BACSU
10 PsiBlast_PDB 83.5748% -81 - C5 -1UX1 3.7 CDD_BACSU
38 PsiBlast_CBE 83.5548% -80 - C5 -1UX1 3.6 CDD_BACSU
39 PsiBlast_CBE 81.5148% -83 - C5 -1UX1 3.7 CDD_BACSU
44 PsiBlast_CBE 70.5943% -77 - C5 -3R2N 3.7 ?
12 PsiBlast_PDB 66.9543% -81 - C5 -3R2N 3.6 ?
46 PsiBlast_CBE 66.5443% -73 - C5 -3R2N 3.8 ?
45 PsiBlast_CBE 65.9443% -76 - C5 -3R2N 2.3 ?
67 HHSearch 63.7533% -57 - C5 -3R2N 3.6 ?