@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0978: (2016-03-20 )
MSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNFIVSDFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANFFGITKDDKFVTPYSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLDEFKEAGACGTAAVITPIGGIQTKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK

Atome Classification :

(73 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLP_A_3(3UZO)
?
[Raw transfer]




PLP_A_3(3UZO)
?
[Raw transfer]




PLP_A_3(3UYY)
?
[Raw transfer]




PLP_B_4(3UYY)
?
[Raw transfer]




ILP_B_4(1KT8)
BCAT2_HUMAN
[Raw transfer]




PLP_B_5(3UZO)
?
[Raw transfer]




PLP_B_4(1EKV)
BCAT2_HUMAN
[Raw transfer]




PMP_D_4(1KTA)
BCAT2_HUMAN
[Raw transfer]




PMP_E_5(1KTA)
BCAT2_HUMAN
[Raw transfer]




PMP_A_2(3HT5)
ILVE_MYCTU
[Raw transfer]




PLP_I_9(1I1L)
ILVE_ECOLI
[Raw transfer]




PLP_G_7(1I1L)
ILVE_ECOLI
[Raw transfer]




PLP_K_11(1I1L)
ILVE_ECOLI
[Raw transfer]




PLP_A_3(1EKV)
BCAT2_HUMAN
[Raw transfer]




PLP_A_3(3DTG)
ILVE_MYCS2
[Raw transfer]




PLP_A_3(3JZ6)
ILVE_MYCS2
[Raw transfer]




PLP_B_5(3JZ6)
ILVE_MYCS2
[Raw transfer]




PLP_A_3(3DTG)
ILVE_MYCS2
[Raw transfer]




PLP_B_5(3DTG)
ILVE_MYCS2
[Raw transfer]




PGU_G_7(1IYE)
ILVE_ECOLI
[Raw transfer]




PLP_A_4(2EIY)
?
[Raw transfer]




PLP_B_4(1EKP)
BCAT2_HUMAN
[Raw transfer]




PGU_G_7(1IYE)
ILVE_ECOLI
[Raw transfer]




PGU_K_11(1IYE)
ILVE_ECOLI
[Raw transfer]




PLP_A_3(1EKP)
BCAT2_HUMAN
[Raw transfer]




PLP_B_4(2HG8)
BCAT2_HUMAN
[Raw transfer]




PLP_B_4(1EKF)
BCAT2_HUMAN
[Raw transfer]




PLP_A_3(1EKF)
BCAT2_HUMAN
[Raw transfer]




PLP_A_7(1I1M)
ILVE_ECOLI
[Raw transfer]




PLP_B_9(1A3G)
ILVE_ECOLI
[Raw transfer]




PLP_B_9(1IYD)
ILVE_ECOLI
[Raw transfer]




PLP_C_13(1I1M)
ILVE_ECOLI
[Raw transfer]




PLP_A_7(1IYD)
ILVE_ECOLI
[Raw transfer]




PLP_A_7(1A3G)
ILVE_ECOLI
[Raw transfer]




PLP_A_7(1I1K)
ILVE_ECOLI
[Raw transfer]




PLP_A_7(1A3G)
ILVE_ECOLI
[Raw transfer]




PLP_C_11(1I1K)
ILVE_ECOLI
[Raw transfer]




PLP_A_3(5BWW)
BCAT2_HUMAN
[Raw transfer]




GOL_A_5(3DTF)
ILVE_MYCS2
[Raw transfer]




PLP_B_5(2COG)
BCAT1_HUMAN
[Raw transfer]




PLP_A_3(5BWT)
BCAT2_HUMAN
[Raw transfer]




4VT_A_4(5BWR)
BCAT2_HUMAN
[Raw transfer]




PLP_B_4(2A1H)
BCAT2_HUMAN
[Raw transfer]




PLP_B_5(2COJ)
BCAT1_HUMAN
[Raw transfer]




PLP_A_4(2HGW)
BCAT2_HUMAN
[Raw transfer]




PLP_A_3(5BWX)
BCAT2_HUMAN
[Raw transfer]




PLP_A_3(5BWU)
BCAT2_HUMAN
[Raw transfer]




PLP_B_9(1I1K)
ILVE_ECOLI
[Raw transfer]




PGU_I_9(1IYE)
ILVE_ECOLI
[Raw transfer]




PLP_B_4(2HGX)
BCAT2_HUMAN
[Raw transfer]




PLP_A_3(2A1H)
BCAT2_HUMAN
[Raw transfer]




PLP_B_11(5BWT)
BCAT2_HUMAN
[Raw transfer]




4VT_B_13(5BWR)
BCAT2_HUMAN
[Raw transfer]




GOL_B_6(3DTF)
ILVE_MYCS2
[Raw transfer]




PLP_A_3(5BWV)
BCAT2_HUMAN
[Raw transfer]




PLP_A_3(5CR5)
?
[Raw transfer]




GLU_B_6(3UZO)
?
[Raw transfer]




COI_E_5(2HDK)
BCAT2_HUMAN
[Raw transfer]




KIV_C_3(1KTA)
BCAT2_HUMAN
[Raw transfer]




4MV_B_7(2COG)
BCAT1_HUMAN
[Raw transfer]




ACY_B_7(2HGX)
BCAT2_HUMAN
[Raw transfer]




GLU_A_4(3UZO)
?
[Raw transfer]




PLP_B_4(2HDK)
BCAT2_HUMAN
[Raw transfer]




PLP_A_3(2HDK)
BCAT2_HUMAN
[Raw transfer]




ACY_F_6(2HDK)
BCAT2_HUMAN
[Raw transfer]




PLP_C_11(1IYD)
ILVE_ECOLI
[Raw transfer]




PLP_B_10(1I1M)
ILVE_ECOLI
[Raw transfer]




MLE_E_5(2HG8)
BCAT2_HUMAN
[Raw transfer]




PLP_C_11(1A3G)
ILVE_ECOLI
[Raw transfer]




775_A_4(5BWV)
BCAT2_HUMAN
[Raw transfer]




KIV_C_3(1KTA)
BCAT2_HUMAN
[Raw transfer]




4W4_A_4(5BWX)
BCAT2_HUMAN
[Raw transfer]




4W6_A_4(5BWW)
BCAT2_HUMAN
[Raw transfer]




4VT_A_4(5BWR)
BCAT2_HUMAN
[Raw transfer]




4VR_A_4(5BWU)
BCAT2_HUMAN
[Raw transfer]




EL1_A_4(5CR5)
?
[Raw transfer]




GBN_B_5(2A1H)
BCAT2_HUMAN
[Raw transfer]




GBN_A_6(2A1H)
BCAT2_HUMAN
[Raw transfer]




ILP_B_4(1KT8)
BCAT2_HUMAN
[Raw transfer]




25 PsiBlast_CBE 98.9878%-104 - C7 -3UYY 5.3 ?
3 PsiBlast_PDB 98.7478%-100 - C7 -3UZO 5.6 ?
4 PsiBlast_PDB 97.8076%-103 - C7 -4DQN - ? -
73 HHSearch 97.7677%-102 - C7 -3UZO 5.6 ?
21 PsiBlast_CBE 97.6578%-101 - C7 -3UZO 5.0 ?
1 PsiBlast_PDB 97.2778%-101 - C7 -3UYY 5.5 ?
2 PsiBlast_PDB 96.9878% -95 - C7 -3UZB - ? -
23 PsiBlast_CBE 96.8378% -94 - C7 -3UZB - ? -
24 PsiBlast_CBE 95.1278% -93 - C7 -3UZB - ? -
22 PsiBlast_CBE 94.7278% -96 - C7 -3UZB - ? -
28 PsiBlast_CBE 80.9440% -92 - C7 -3DTF 1.9 ILVE_MYCS2
74 HHSearch 80.1041% -90 - C7 -3DTG 4.0 ILVE_MYCS2
6 PsiBlast_PDB 80.0440% -87 - C7 -3DTF 2.2 ILVE_MYCS2
5 PsiBlast_PDB 79.7840% -88 - C7 -3JZ6 4.1 ILVE_MYCS2
27 PsiBlast_CBE 79.7140% -89 - C7 -3DTG 4.2 ILVE_MYCS2
26 PsiBlast_CBE 79.4940% -89 - C7 -3JZ6 4.5 ILVE_MYCS2
7 PsiBlast_PDB 79.3940% -87 - C7 -3DTG 4.0 ILVE_MYCS2
8 PsiBlast_PDB 76.3239% -92 - C7 -3HT5 4.9 ILVE_MYCTU
30 PsiBlast_CBE 75.2832% -88 - C7 -2COG 4.4 BCAT1_HUMAN
31 PsiBlast_CBE 74.8732% -84 - C7 -2ABJ - BCAT1_HUMAN -
29 PsiBlast_CBE 74.6032% -88 - C7 -2COJ 4.4 BCAT1_HUMAN
36 PsiBlast_CBE 74.0431% -89 - C7 -2HG8 4.2 BCAT2_HUMAN
35 PsiBlast_CBE 74.0431% -90 - C7 -2HGX 4.3 BCAT2_HUMAN
44 PsiBlast_CBE 74.0231% -90 - C7 -2A1H 4.5 BCAT2_HUMAN
52 PsiBlast_CBE 73.9231% -90 - C7 -1EKP 4.3 BCAT2_HUMAN
20 PsiBlast_PDB 73.8631% -87 - C7 -1EKP 3.3 BCAT2_HUMAN
45 PsiBlast_CBE 73.5731% -89 - C7 -2A1H 4.4 BCAT2_HUMAN
38 PsiBlast_CBE 73.5731% -89 - C7 -5BWX 2.8 BCAT2_HUMAN
53 PsiBlast_CBE 73.5431% -92 - C7 -1EKF 4.3 BCAT2_HUMAN
40 PsiBlast_CBE 73.1731% -92 - C7 -5BWV 2.6 BCAT2_HUMAN
37 PsiBlast_CBE 73.1531% -91 - C7 -5CR5 2.1 ?
18 PsiBlast_PDB 73.1531% -91 - C7 -5CR5 3.6 ?
41 PsiBlast_CBE 73.1131% -91 - C7 -5BWU 2.7 BCAT2_HUMAN
51 PsiBlast_CBE 73.0431% -88 - C7 -1EKV 4.4 BCAT2_HUMAN
10 PsiBlast_PDB 72.9831% -88 - C7 -2HDK 4.5 BCAT2_HUMAN
19 PsiBlast_PDB 72.8831% -91 - C7 -1EKF 4.2 BCAT2_HUMAN
15 PsiBlast_PDB 72.8731% -92 - C7 -5BWV 3.4 BCAT2_HUMAN
13 PsiBlast_PDB 72.7331% -90 - C7 -5BWT 3.7 BCAT2_HUMAN
50 PsiBlast_CBE 72.4731% -87 - C7 -1EKV 4.2 BCAT2_HUMAN
48 PsiBlast_CBE 72.3731% -90 - C7 -1KT8 6.1 BCAT2_HUMAN
34 PsiBlast_CBE 72.3631% -87 - C7 -2HDK 4.6 BCAT2_HUMAN
49 PsiBlast_CBE 72.3531% -90 - C7 -1KT8 2.8 BCAT2_HUMAN
11 PsiBlast_PDB 72.2731% -89 - C7 -2HGW 3.8 BCAT2_HUMAN
17 PsiBlast_PDB 71.8931% -91 - C7 -5BWX 3.4 BCAT2_HUMAN
47 PsiBlast_CBE 71.8031% -88 - C7 -1KTA 4.9 BCAT2_HUMAN
16 PsiBlast_PDB 71.4031% -92 - C7 -5BWW 3.6 BCAT2_HUMAN
46 PsiBlast_CBE 71.3031% -88 - C7 -1KTA 4.4 BCAT2_HUMAN
39 PsiBlast_CBE 71.2231% -90 - C7 -5BWW 2.8 BCAT2_HUMAN
12 PsiBlast_PDB 70.7731% -89 - C7 -5BWR 3.9 BCAT2_HUMAN
14 PsiBlast_PDB 70.6031% -88 - C7 -5BWU 3.4 BCAT2_HUMAN
43 PsiBlast_CBE 70.2131% -86 - C7 -5BWR 3.7 BCAT2_HUMAN
42 PsiBlast_CBE 70.0931% -88 - C7 -5BWT 4.9 BCAT2_HUMAN
78 HHSearch 63.9532% -83 * C7 *1IYE 7.8 ILVE_ECOLI
77 HHSearch 63.4230% -75 - C7 -2EIY 3.9 ?
61 PsiBlast_CBE 61.3331% -70 - C7 -1IYD 4.2 ILVE_ECOLI
59 PsiBlast_CBE 60.7531% -70 - C7 -1IYE 7.8 ILVE_ECOLI
68 PsiBlast_CBE 60.3731% -73 - C7 -1I1L 5.1 ILVE_ECOLI
58 PsiBlast_CBE 60.3731% -66 - C7 -1IYE 7.6 ILVE_ECOLI
67 PsiBlast_CBE 60.2931% -70 - C7 -1I1L 4.9 ILVE_ECOLI
66 PsiBlast_CBE 60.2931% -71 - C7 -1I1L 4.7 ILVE_ECOLI
65 PsiBlast_CBE 60.2131% -70 - C7 -1I1M 3.6 ILVE_ECOLI
62 PsiBlast_CBE 59.9631% -69 - C7 -1IYD 4.2 ILVE_ECOLI
60 PsiBlast_CBE 59.8631% -70 - C7 -1IYD 3.5 ILVE_ECOLI
57 PsiBlast_CBE 59.7731% -68 - C7 -1IYE 7.7 ILVE_ECOLI
64 PsiBlast_CBE 59.7631% -72 - C7 -1I1M 3.7 ILVE_ECOLI
63 PsiBlast_CBE 59.5631% -71 - C7 -1I1M 3.9 ILVE_ECOLI
88 Fugue 58.8730% -76 - C7 -1A3G 3.6 ILVE_ECOLI
56 PsiBlast_CBE 57.6331% -71 - C7 -1A3G 3.6 ILVE_ECOLI
55 PsiBlast_CBE 57.5731% -70 - C7 -1A3G 3.6 ILVE_ECOLI
71 PsiBlast_CBE 56.9131% -71 - C7 -1I1K 4.0 ILVE_ECOLI
69 PsiBlast_CBE 56.3531% -70 - C7 -1I1K 3.5 ILVE_ECOLI
70 PsiBlast_CBE 55.8631% -69 - C7 -1I1K 3.8 ILVE_ECOLI
54 PsiBlast_CBE 55.0831% -66 - C7 -1A3G 4.1 ILVE_ECOLI