@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1389: (2016-05-01 )
MSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLVGTAPGSP

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0O2_B_8(4QRH)
?
[Raw transfer]



GDP_S_19(2AN9)
KGUA_ECOLI
[Raw transfer]



5GP_D_4(1LVG)
KGUA_MOUSE
[Raw transfer]



0O2_C_12(4QRH)
?
[Raw transfer]



0O2_D_18(4QRH)
?
[Raw transfer]



G5P_G_7(2F3R)
KGUA_ECOLI
[Raw transfer]



5GP_M_13(2ANB)
KGUA_ECOLI
[Raw transfer]



GDP_M_13(2AN9)
KGUA_ECOLI
[Raw transfer]



5GP_C_11(2J41)
KGUA_STAAC
[Raw transfer]



5GP_A_2(2QOR)
?
[Raw transfer]



5GP_D_4(1EX7)
KGUA_YEAST
[Raw transfer]



5GP_D_15(2J41)
KGUA_STAAC
[Raw transfer]



5GP_A_4(3TR0)
KGUA_COXBU
[Raw transfer]



FMT_A_3(1S4Q)
KGUA_MYCTU
[Raw transfer]



5GP_A_4(3TR0)
KGUA_COXBU
[Raw transfer]



FMT_B_2(1Z8F)
KGUA_MYCTU
[Raw transfer]



LGP_G_7(2F3T)
KGUA_ECOLI
[Raw transfer]



ADP_C_3(1LVG)
KGUA_MOUSE
[Raw transfer]



LGP_G_7(2F3T)
KGUA_ECOLI
[Raw transfer]



ADP_C_3(1LVG)
KGUA_MOUSE
[Raw transfer]



LGP_G_7(2F3T)
KGUA_ECOLI
[Raw transfer]



LGP_G_7(2F3T)
KGUA_ECOLI
[Raw transfer]
4 PsiBlast_PDB 99.33100%-131 - C1 -1ZNY - KGUA_MYCTU -
3 PsiBlast_PDB 98.64100%-130 - C1 -1ZNX - KGUA_MYCTU -
5 PsiBlast_PDB 98.58100%-125 - C1 -1ZNZ - KGUA_MYCTU -
1 PsiBlast_PDB 98.3999%-125 - C1 -1S4Q 3.5 KGUA_MYCTU
98 HHSearch 98.36100%-129 - C1 -1ZNW - KGUA_MYCTU -
2 PsiBlast_PDB 98.36100%-129 - C1 -1ZNW - KGUA_MYCTU -
6 PsiBlast_PDB 97.7298%-128 - C1 -1Z8F 3.4 KGUA_MYCTU
14 PsiBlast_PDB 78.2735%-115 - C1 -2ANC - KGUA_ECOLI -
19 PsiBlast_PDB 78.2335%-116 - C1 -1S96 - KGUA_ECOLI -
9 PsiBlast_PDB 77.7941%-114 - C1 -1GKY - KGUA_YEAST -
28 PsiBlast_CBE 77.4235%-116 - C1 -2F3T 3.4 KGUA_ECOLI
16 PsiBlast_PDB 77.3235%-115 - C1 -2F3T 3.1 KGUA_ECOLI
32 PsiBlast_CBE 76.6234%-110 * C1 *1Z6G - ? -
12 PsiBlast_PDB 76.1835%-109 - C1 -2AN9 5.0 KGUA_ECOLI
10 PsiBlast_PDB 76.0239%-122 - C1 -4F4J - KGUA_YEAST -
102 HHSearch 75.8642% -91 - C1 -1LVG 8.3 KGUA_MOUSE
8 PsiBlast_PDB 75.7241%-113 - C1 -1EX7 - KGUA_YEAST -
31 PsiBlast_CBE 75.6135%-110 - C1 -2AN9 5.9 KGUA_ECOLI
27 PsiBlast_CBE 75.4235%-114 - C1 -2F3T 2.3 KGUA_ECOLI
18 PsiBlast_PDB 75.2543% -94 - C1 -1LVG 8.2 KGUA_MOUSE
101 HHSearch 75.1537%-104 - C1 -3TR0 5.2 KGUA_COXBU
29 PsiBlast_CBE 74.8935%-117 - C1 -2F3T 3.2 KGUA_ECOLI
106 HHSearch 73.6742%-104 - C1 -1EX7 5.8 KGUA_YEAST
17 PsiBlast_PDB 73.0938%-107 - C1 -3TR0 5.3 KGUA_COXBU
15 PsiBlast_PDB 72.9135%-110 - C1 -2F3R 9.3 KGUA_ECOLI
92 HHSearch 72.4132% -93 - C1 -2QOR 6.9 ?
13 PsiBlast_PDB 72.2635%-108 - C1 -2ANB 6.4 KGUA_ECOLI
24 PsiBlast_CBE 65.8942% -98 - C1 -4QRH 9.5 ?
23 PsiBlast_CBE 65.6642%-101 - C1 -4QRH 9.3 ?
22 PsiBlast_CBE 64.7042% -96 - C1 -4QRH 9.5 ?
26 PsiBlast_CBE 64.6342% -95 - C1 -2J41 6.5 KGUA_STAAC
25 PsiBlast_CBE 64.2542%-103 - C1 -2J41 6.3 KGUA_STAAC