@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1459: (2016-03-25 )
MKVVVQRVKEASVTNDTLNNQIKKGYCLLVGIGQNSTEQDADVIAKKIANARLFEDDNNKLNFNIQQMNGEILSVSQFTLYADVKKGNRPGFSNSKNPDQAVKIYEYFNDALRAYGLTVKTGEFGTHMNVSINNDGPVTIIYESQDGKIQ

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D3Y_A_3(4NBI)
?
[Raw transfer]



EPE_A_9(3LMV)
?
[Raw transfer]



EPE_C_10(3LMV)
?
[Raw transfer]



EPE_D_8(3LMV)
?
[Raw transfer]



DHI_C_8(3KOC)
?
[Raw transfer]



EPE_B_7(3LMV)
?
[Raw transfer]



DSN_D_9(3KOD)
?
[Raw transfer]



ADP_B_7(3KO4)
?
[Raw transfer]



ADP_C_9(3KO5)
?
[Raw transfer]



ADP_B_8(3KO5)
?
[Raw transfer]



DLY_C_7(3KO7)
?
[Raw transfer]



ADP_D_10(3KO5)
?
[Raw transfer]



ADP_D_9(3KO4)
?
[Raw transfer]



DHI_D_7(3KOC)
?
[Raw transfer]



DSN_C_8(3KOD)
?
[Raw transfer]



ADP_C_8(3KO4)
?
[Raw transfer]



ADP_C_7(3KO3)
?
[Raw transfer]
80 HHSearch 91.7345% -92 * C9 *2DBO - DTD_AQUAE -
69 PsiBlast_CBE 91.5142% -92 - C9 -2OKV - DTD1_HUMAN -
1 PsiBlast_PDB 91.0944% -92 - C9 -2DBO - DTD_AQUAE -
2 PsiBlast_PDB 90.1345% -95 - C9 -1J7G - DTD_HAEIN -
17 PsiBlast_PDB 90.0838% -98 - C9 -4NBI 8.2 ?
70 PsiBlast_CBE 89.6542% -95 - C9 -2OKV - DTD1_HUMAN -
7 PsiBlast_PDB 89.4138% -96 - C9 -3KO7 - ? -
71 Fugue 89.3039% -93 - C9 -1JKE - DTD_ECOLI -
19 PsiBlast_PDB 89.2042% -87 - C9 -2OKV - DTD1_HUMAN -
18 PsiBlast_PDB 89.0938%-105 - C9 -4NBJ - ? -
68 PsiBlast_CBE 89.0742% -97 - C9 -2OKV - DTD1_HUMAN -
79 HHSearch 88.7840% -92 - C9 -1JKE - DTD_ECOLI -
3 PsiBlast_PDB 88.6639% -94 - C9 -1JKE - DTD_ECOLI -
81 HHSearch 88.6343% -86 - C9 -1J7G - DTD_HAEIN -
21 PsiBlast_CBE 88.6339% -96 - C9 -1JKE - DTD_ECOLI -
26 PsiBlast_CBE 88.5938%-101 - C9 -4NBJ - ? -
43 PsiBlast_CBE 88.4738% -98 - C9 -3LMT - ? -
54 PsiBlast_CBE 88.4038% -99 - C9 -3KO9 - ? -
64 PsiBlast_CBE 88.3438%-100 - C9 -3KO4 4.0 ?
6 PsiBlast_PDB 88.3138% -98 - C9 -3KO5 - ? -
52 PsiBlast_CBE 88.2238% -95 - C9 -3KOC 4.2 ?
33 PsiBlast_CBE 88.0038%-104 - C9 -3LMV 2.3 ?
35 PsiBlast_CBE 87.9538%-100 - C9 -3LMV 1.8 ?
51 PsiBlast_CBE 87.9138%-101 - C9 -3KOC 3.2 ?
16 PsiBlast_PDB 87.6138% -98 - C9 -3LMV 2.5 ?
34 PsiBlast_CBE 87.5238% -96 - C9 -3LMV 2.1 ?
59 PsiBlast_CBE 87.2438%-101 - C9 -3KO5 3.2 ?
55 PsiBlast_CBE 87.2338%-100 - C9 -3KO7 2.9 ?
66 PsiBlast_CBE 87.1738% -99 - C9 -3KO3 2.9 ?
62 PsiBlast_CBE 86.4838%-102 - C9 -3KO4 2.9 ?
63 PsiBlast_CBE 86.3238% -97 - C9 -3KO4 3.2 ?
48 PsiBlast_CBE 86.0638%-103 - C9 -3KOD 2.9 ?
58 PsiBlast_CBE 85.8238% -99 - C9 -3KO5 3.3 ?
57 PsiBlast_CBE 85.7838% -99 - C9 -3KO5 3.1 ?