@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA0652: (2016-01-13 )
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR

Atome Classification :

(60 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SP1_A_4(4R8H)
?
[Raw transfer]




CMP_J_10(1ZRF)
CRP_ECOLI
[Raw transfer]




CMP_A_4(4I01)
CRP_ECOLI
[Raw transfer]




CMP_A_8(4I02)
CRP_ECOLI
[Raw transfer]




CMP_B_7(3RPQ)
CRP_ECOLI
[Raw transfer]




CMP_A_4(4I0B)
CRP_ECOLI
[Raw transfer]




CMP_A_2(2OZ6)
VFR_PSEAE
[Raw transfer]




CMP_A_2(2OZ6)
VFR_PSEAE
[Raw transfer]




CMP_A_4(4I0B)
CRP_ECOLI
[Raw transfer]




CMP_A_4(4I01)
CRP_ECOLI
[Raw transfer]




CMP_D_13(4I02)
CRP_ECOLI
[Raw transfer]




CMP_A_5(1HW5)
CRP_ECOLI
[Raw transfer]




SP1_B_11(4R8H)
?
[Raw transfer]




CMP_A_4(3ROU)
CRP_ECOLI
[Raw transfer]




CMP_A_4(3KCC)
CRP_ECOLI
[Raw transfer]




CMP_A_4(4HZF)
CRP_ECOLI
[Raw transfer]




CMP_A_4(3KCC)
CRP_ECOLI
[Raw transfer]




SP1_A_4(4R8H)
?
[Raw transfer]




CMP_B_6(3KCC)
CRP_ECOLI
[Raw transfer]




CMP_A_4(4I0A)
CRP_ECOLI
[Raw transfer]




CMP_A_4(3RYR)
CRP_ECOLI
[Raw transfer]




CMP_B_10(4I02)
CRP_ECOLI
[Raw transfer]




CMP_F_6(1I5Z)
CRP_ECOLI
[Raw transfer]




CMP_A_8(4I02)
CRP_ECOLI
[Raw transfer]




CMP_B_7(3RPQ)
CRP_ECOLI
[Raw transfer]




CMP_E_5(1I6X)
CRP_ECOLI
[Raw transfer]




NACID_E_3(1CGP)
CRP_ECOLI
[Raw transfer]

-

NACID_E_5(3N4M)
CRP_ECOLI
[Raw transfer]

-

NACID_F_4(1RUN)
CRP_ECOLI
[Raw transfer]

-

NACID_J_3(1LB2)
CRP_ECOLI
[Raw transfer]

-

NACID_Z_4(1ZRC)
CRP_ECOLI
[Raw transfer]

-

NACID_D_2(1RUN)
CRP_ECOLI
[Raw transfer]

-

NACID_C_3(2CGP)
CRP_ECOLI
[Raw transfer]

-

NACID_X_2(1ZRC)
CRP_ECOLI
[Raw transfer]

-

NACID_F_4(1J59)
CRP_ECOLI
[Raw transfer]

-

NACID_D_2(1J59)
CRP_ECOLI
[Raw transfer]

-

NACID_B_1(1O3Q)
CRP_ECOLI
[Raw transfer]

-

NACID_D_2(1O3T)
CRP_ECOLI
[Raw transfer]

-

NACID_D_2(1O3T)
CRP_ECOLI
[Raw transfer]

-

NACID_F_4(1RUO)
CRP_ECOLI
[Raw transfer]

-

NACID_C_3(1O3Q)
CRP_ECOLI
[Raw transfer]

-

NACID_X_2(1ZRD)
CRP_ECOLI
[Raw transfer]

-

NACID_C_3(1O3R)
CRP_ECOLI
[Raw transfer]

-

NACID_Z_4(1ZRF)
CRP_ECOLI
[Raw transfer]

-

NACID_E_3(1O3T)
CRP_ECOLI
[Raw transfer]

-

CMP_A_5(1HW5)
CRP_ECOLI
[Raw transfer]




NACID_Z_4(1ZRE)
CRP_ECOLI
[Raw transfer]

-

CMP_A_4(4HZF)
CRP_ECOLI
[Raw transfer]




CMP_A_4(4I0A)
CRP_ECOLI
[Raw transfer]




NACID_X_2(1ZRF)
CRP_ECOLI
[Raw transfer]

-

CMP_A_4(3ROU)
CRP_ECOLI
[Raw transfer]




NACID_X_2(1ZRE)
CRP_ECOLI
[Raw transfer]

-

CMP_F_6(1I5Z)
CRP_ECOLI
[Raw transfer]




CMP_A_4(3RYR)
CRP_ECOLI
[Raw transfer]




CMP_E_5(1I6X)
CRP_ECOLI
[Raw transfer]




NACID_D_2(1RUO)
CRP_ECOLI
[Raw transfer]

-

NACID_Z_4(1ZRD)
CRP_ECOLI
[Raw transfer]

-

NACID_C_3(1O3S)
CRP_ECOLI
[Raw transfer]

-

90 HHSearch 95.03100%-142 - C2 -2OZ6 6.5 VFR_PSEAE
1 PsiBlast_PDB 94.80100%-141 - C2 -2OZ6 6.5 VFR_PSEAE
77 PsiBlast_CBE 87.4666%-147 - C2 -4I0B 6.3 CRP_ECOLI
27 PsiBlast_CBE 86.0666%-142 - C2 -4FT8 - CRP_ECOLI -
44 PsiBlast_CBE 86.0566%-137 - C2 -4I09 - CRP_ECOLI -
38 PsiBlast_CBE 85.9666%-140 - C2 -1I5Z 4.1 CRP_ECOLI
55 PsiBlast_CBE 85.6966%-141 - C2 -4I0A 4.2 CRP_ECOLI
53 PsiBlast_CBE 85.6566%-139 - C2 -3QOP - CRP_ECOLI -
39 PsiBlast_CBE 85.3166%-141 - C2 -4R8H 6.2 ?
15 PsiBlast_PDB 85.0666%-136 - C2 -1ZRF 3.0 CRP_ECOLI
61 PsiBlast_CBE 84.9166%-141 - C2 -4I02 5.4 CRP_ECOLI
70 PsiBlast_CBE 84.8966%-139 - C2 -3KCC 6.6 CRP_ECOLI
32 PsiBlast_CBE 84.6566%-139 - C2 -1ZRF 2.8 CRP_ECOLI
50 PsiBlast_CBE 84.6466%-137 - C2 -3ROU 6.2 CRP_ECOLI
63 PsiBlast_CBE 84.5866%-142 - C2 -1I6X 4.4 CRP_ECOLI
56 PsiBlast_CBE 84.5266%-137 - C2 -4I0A 5.0 CRP_ECOLI
76 PsiBlast_CBE 84.5066%-135 - C2 -4I0B Error CRP_ECOLI
24 PsiBlast_CBE 84.4666%-136 - C2 -3RYR 4.7 CRP_ECOLI
43 PsiBlast_CBE 84.3966%-138 - C2 -4I09 - CRP_ECOLI -
60 PsiBlast_CBE 84.3466%-140 - C2 -4I02 - CRP_ECOLI -
71 PsiBlast_CBE 84.3266%-138 - C2 -3KCC 6.9 CRP_ECOLI
58 PsiBlast_CBE 84.1966%-138 - C2 -4I02 Error CRP_ECOLI
14 PsiBlast_PDB 84.1766%-134 - C2 -1ZRE 2.9 CRP_ECOLI
6 PsiBlast_PDB 84.1766%-141 - C2 -3RYR 5.8 CRP_ECOLI
19 PsiBlast_PDB 84.0666%-135 - C2 -3N4M 2.9 CRP_ECOLI
42 PsiBlast_CBE 84.0466%-136 - C2 -4HZF 6.5 CRP_ECOLI
40 PsiBlast_CBE 83.9266%-138 - C2 -4R8H 6.3 ?
94 HHSearch 83.7763%-133 - C2 -3KCC 6.9 CRP_ECOLI
59 PsiBlast_CBE 83.6666%-139 - C2 -4I02 6.2 CRP_ECOLI
45 PsiBlast_CBE 83.5566%-143 - C2 -4I01 Error CRP_ECOLI
12 PsiBlast_PDB 83.5566%-131 - C2 -1ZRC 5.0 CRP_ECOLI
46 PsiBlast_CBE 83.5166%-134 - C2 -4I01 5.8 CRP_ECOLI
62 PsiBlast_CBE 83.4766%-141 - C2 -4I02 6.2 CRP_ECOLI
2 PsiBlast_PDB 83.4266%-133 - C2 -2CGP 3.3 CRP_ECOLI
10 PsiBlast_PDB 83.3166%-136 - C2 -1LB2 3.9 CRP_ECOLI
78 PsiBlast_CBE 83.1266%-135 - C2 -1O3S 4.4 CRP_ECOLI
49 PsiBlast_CBE 83.1066%-138 - C2 -3ROU 4.0 CRP_ECOLI
13 PsiBlast_PDB 82.9566%-133 - C2 -1ZRD 5.1 CRP_ECOLI
74 PsiBlast_CBE 82.8166%-135 - C2 -1O3R 3.6 CRP_ECOLI
11 PsiBlast_PDB 82.7466%-139 - C2 -1I5Z 6.0 CRP_ECOLI
41 PsiBlast_CBE 82.6066%-142 - C2 -4HZF 4.1 CRP_ECOLI
47 PsiBlast_CBE 82.4666%-135 - C2 -3RPQ 5.3 CRP_ECOLI
35 PsiBlast_CBE 82.3866%-138 - C2 -1ZRC 3.3 CRP_ECOLI
75 PsiBlast_CBE 82.1266%-131 - C2 -1O3Q 5.1 CRP_ECOLI
66 PsiBlast_CBE 82.0966%-131 - C2 -1HW5 5.6 CRP_ECOLI
48 PsiBlast_CBE 81.9666%-140 - C2 -3RPQ Error CRP_ECOLI
33 PsiBlast_CBE 81.4766%-133 - C2 -1ZRE 4.8 CRP_ECOLI
64 PsiBlast_CBE 81.3266%-138 - C2 -1I6X 4.5 CRP_ECOLI
65 PsiBlast_CBE 81.0766%-139 - C2 -1HW5 4.2 CRP_ECOLI
79 PsiBlast_CBE 80.5566%-135 - C2 -1CGP Error CRP_ECOLI
37 PsiBlast_CBE 80.4066%-129 - C2 -1J59 4.4 CRP_ECOLI
8 PsiBlast_PDB 79.8966%-137 - C2 -1RUN 2.6 CRP_ECOLI
34 PsiBlast_CBE 79.6666%-132 - C2 -1ZRD 3.3 CRP_ECOLI
36 PsiBlast_CBE 79.1066%-131 - C2 -1RUN 2.7 CRP_ECOLI
67 PsiBlast_CBE 78.4966%-129 - C2 -1RUO 4.5 CRP_ECOLI
68 PsiBlast_CBE 77.6566%-129 - C2 -1RUO 4.5 CRP_ECOLI
9 PsiBlast_PDB 77.2366%-130 - C2 -1J59 4.3 CRP_ECOLI
73 PsiBlast_CBE 76.9466%-128 - C2 -1O3T 2.3 CRP_ECOLI
109 Fugue 76.8065%-126 * C2 *1O3T 2.3 CRP_ECOLI
72 PsiBlast_CBE 74.6266%-130 - C2 -1O3T 2.7 CRP_ECOLI