@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA5141: (2016-03-04 )
MLIIPAIDLKDGACVRLRQGLMEDATVFSDDPVAMAAKWVDGGCRRLHLVDLNGAFEGKPVNGEVVTAIARRYPDLPIQIGGGIRSLETIEHYVRAGVSYVIIGTKAVKQPEFVGEACRAFPGKVIVGLDAKDGFVATDGWAEVSEVQVIDLARRFEADGVSAIVYTDISKDGMMQGCNVEATAALANATRIPVIASGGIHNLGDIQKLLDARTPGIIGAITGRAIYEGTLDVAEAQALCDNFKA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2ER_A_2(2Y88)
HIS4_MYCTU
[Raw transfer]




2ER_A_2(2Y88)
HIS4_MYCTU
[Raw transfer]




GUO_A_2(5A5W)
?
[Raw transfer]




1PR_A_2(3ZS4)
HIS4_MYCTU
[Raw transfer]




GUO_A_2(5AHF)
?
[Raw transfer]




137_C_16(2Y85)
HIS4_MYCTU
[Raw transfer]




137_D_21(2Y85)
HIS4_MYCTU
[Raw transfer]




137_A_7(2Y85)
HIS4_MYCTU
[Raw transfer]




AMZ_A_3(4TX9)
?
[Raw transfer]




14 PsiBlast_PDB 91.1233%-127 - C3 -2Y85 5.3 HIS4_MYCTU
25 PsiBlast_CBE 91.0633%-130 - C3 -2Y85 5.4 HIS4_MYCTU
26 PsiBlast_CBE 90.9033%-125 - C3 -2Y85 5.5 HIS4_MYCTU
13 PsiBlast_PDB 90.8534%-124 - C3 -5A5W 9.5 ?
66 HHSearch 90.7032%-125 * C3 *2Y88 9.9 HIS4_MYCTU
15 PsiBlast_PDB 89.4833%-123 - C3 -3ZS4 8.2 HIS4_MYCTU
16 PsiBlast_PDB 89.2532%-123 - C3 -2Y88 9.9 HIS4_MYCTU
21 PsiBlast_CBE 88.8534%-141 - C3 -4AXK - HIS4_COREF -
1 PsiBlast_PDB 88.4933%-122 - C3 -2CFF - HIS4_THEMA -
3 PsiBlast_PDB 88.1434%-128 - C3 -4AXK - HIS4_COREF -
17 PsiBlast_PDB 87.9332%-133 - C3 -2Y89 - HIS4_MYCTU -
6 PsiBlast_PDB 87.7535%-130 - C3 -5AHE - ? -
27 PsiBlast_CBE 86.7232%-117 - C3 -4EVZ - ? -
24 PsiBlast_CBE 86.6132%-131 - C3 -2W79 - HIS4_THEMA -
5 PsiBlast_PDB 86.6133%-116 - C3 -2VEP - HIS4_STRCO -
12 PsiBlast_PDB 86.6032%-126 - C3 -2W79 - HIS4_THEMA -
10 PsiBlast_PDB 85.7934%-135 - C3 -5AHF 6.4 ?
4 PsiBlast_PDB 85.5933%-130 - C3 -2X30 - HIS4_STRCO -
22 PsiBlast_CBE 84.1533%-110 - C3 -4X2R - ? -
23 PsiBlast_CBE 82.2532%-109 - C3 -4X9S - ? -
8 PsiBlast_PDB 65.9232% -48 - C3 -4TX9 4.4 ?