@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1927: (2015-12-11 )
MKIIIQRVNQASVSIEDDVVGSIEKGLVLLVGIAPEDTTEDIAYAVRKITSMRIFSDDEGKMNLSIQDIKGSVLSISQFTLFADTKKGNRPAFTGAADPVKANQFYDIFNQELANHVSVETGQFGADMQVSLINDGPVTIVLDTKNK

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D3Y_A_3(4NBI)
?
[Raw transfer]



EPE_A_9(3LMV)
?
[Raw transfer]



EPE_D_8(3LMV)
?
[Raw transfer]



EPE_C_10(3LMV)
?
[Raw transfer]



EPE_B_7(3LMV)
?
[Raw transfer]



DHI_C_8(3KOC)
?
[Raw transfer]



DSN_D_9(3KOD)
?
[Raw transfer]



DLY_C_7(3KO7)
?
[Raw transfer]



ADP_C_9(3KO5)
?
[Raw transfer]



ADP_D_9(3KO4)
?
[Raw transfer]



ADP_D_10(3KO5)
?
[Raw transfer]



ADP_B_7(3KO4)
?
[Raw transfer]



ADP_B_8(3KO5)
?
[Raw transfer]



DSN_C_8(3KOD)
?
[Raw transfer]



ADP_C_8(3KO4)
?
[Raw transfer]



ADP_C_7(3KO3)
?
[Raw transfer]
73 HHSearch 94.1049%-126 - C11 -1J7G - DTD_HAEIN -
21 PsiBlast_CBE 93.0947%-130 - C11 -1JKE - DTD_ECOLI -
1 PsiBlast_PDB 93.0749%-128 - C11 -1J7G - DTD_HAEIN -
23 PsiBlast_CBE 93.0547%-123 - C11 -1JKE - DTD_ECOLI -
2 PsiBlast_PDB 92.3147%-125 - C11 -1JKE - DTD_ECOLI -
71 HHSearch 91.9447%-120 - C11 -1JKE - DTD_ECOLI -
81 Fugue 91.6947%-118 * C11 *1JKE - DTD_ECOLI -
22 PsiBlast_CBE 91.1347%-120 - C11 -1JKE - DTD_ECOLI -
69 PsiBlast_CBE 90.9240%-123 - C11 -2OKV - DTD1_HUMAN -
70 PsiBlast_CBE 90.7540%-127 - C11 -2OKV - DTD1_HUMAN -
72 HHSearch 90.7346%-119 - C11 -2DBO - DTD_AQUAE -
74 HHSearch 90.4640%-107 - C11 -2OKV - DTD1_HUMAN -
19 PsiBlast_PDB 90.3840%-120 - C11 -2OKV - DTD1_HUMAN -
68 PsiBlast_CBE 89.8540%-126 - C11 -2OKV - DTD1_HUMAN -
3 PsiBlast_PDB 89.4445%-120 - C11 -2DBO - DTD_AQUAE -
54 PsiBlast_CBE 87.5836%-134 - C11 -3KO9 - ? -
10 PsiBlast_PDB 87.3436%-132 - C11 -3KO3 - ? -
16 PsiBlast_PDB 87.3336%-133 - C11 -3LMV 2.2 ?
27 PsiBlast_CBE 87.0636%-138 - C11 -4NBJ - ? -
59 PsiBlast_CBE 86.9736%-133 - C11 -3KO5 3.1 ?
34 PsiBlast_CBE 86.9736%-133 - C11 -3LMV 2.0 ?
35 PsiBlast_CBE 86.9536%-132 - C11 -3LMV 3.0 ?
66 PsiBlast_CBE 86.2636%-135 - C11 -3KO3 2.8 ?
62 PsiBlast_CBE 86.2636%-132 - C11 -3KO4 3.4 ?
57 PsiBlast_CBE 86.0236%-134 - C11 -3KO5 3.0 ?
33 PsiBlast_CBE 86.0236%-137 - C11 -3LMV 2.3 ?
55 PsiBlast_CBE 85.9236%-130 - C11 -3KO7 2.9 ?
63 PsiBlast_CBE 85.3836%-129 - C11 -3KO4 3.2 ?
64 PsiBlast_CBE 85.1736%-132 - C11 -3KO4 3.8 ?
17 PsiBlast_PDB 84.7936%-123 - C11 -4NBI 8.4 ?
48 PsiBlast_CBE 84.5736%-134 - C11 -3KOD 2.9 ?
58 PsiBlast_CBE 84.4136%-132 - C11 -3KO5 3.3 ?
52 PsiBlast_CBE 84.3536%-124 - C11 -3KOC 4.2 ?