@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2003: (2016-02-03 )
MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAALAQVRARGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAEGVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_5(1X7G)
ACT3_STRCO
[Raw transfer]



NAP_B_3(2RHC)
ACT3_STRCO
[Raw transfer]



NAD_B_8(2ZTL)
?
[Raw transfer]



NDP_A_6(3CSD)
ACT3_STRCO
[Raw transfer]



NAD_B_5(2Q2V)
?
[Raw transfer]



NAD_C_6(2Q2V)
?
[Raw transfer]



NAD_D_13(2ZTL)
?
[Raw transfer]



NAD_D_10(2ZTM)
?
[Raw transfer]



NDP_A_3(4DC0)
ACT3_STRCO
[Raw transfer]



NAD_A_5(2ZTL)
?
[Raw transfer]



NAD_D_10(2ZTV)
?
[Raw transfer]



NAD_D_7(2Q2V)
?
[Raw transfer]



NAD_A_2(3W8E)
?
[Raw transfer]



NAP_B_7(1W4Z)
ACT3_STRCO
[Raw transfer]



NAD_A_2(3W8D)
?
[Raw transfer]



NAD_A_5(2ZTV)
?
[Raw transfer]



NAD_A_2(3W8E)
?
[Raw transfer]



NDP_A_3(4DC1)
ACT3_STRCO
[Raw transfer]



NAD_A_2(3W8F)
?
[Raw transfer]



NAP_A_3(2RH4)
ACT3_STRCO
[Raw transfer]



NAP_B_7(1X7H)
ACT3_STRCO
[Raw transfer]



NAP_A_5(1W4Z)
ACT3_STRCO
[Raw transfer]



NAD_A_5(2ZTM)
?
[Raw transfer]



NDP_B_4(4DC0)
ACT3_STRCO
[Raw transfer]



NAD_C_11(2ZTL)
?
[Raw transfer]



NAP_A_4(2RHC)
ACT3_STRCO
[Raw transfer]



NAD_C_9(2ZTM)
?
[Raw transfer]



NAD_B_10(3VDQ)
?
[Raw transfer]



NAP_B_7(1X7G)
ACT3_STRCO
[Raw transfer]



NAD_C_15(3VDQ)
?
[Raw transfer]



NAP_E_5(1XR3)
ACT3_STRCO
[Raw transfer]



NAD_A_7(3VDQ)
?
[Raw transfer]



NAD_B_7(2ZTV)
?
[Raw transfer]



NAP_B_3(2RHR)
ACT3_STRCO
[Raw transfer]



NAD_D_18(3VDQ)
?
[Raw transfer]



NDP_A_3(3QRW)
ACT3_STRCO
[Raw transfer]



NAD_A_7(3VDR)
?
[Raw transfer]



NAD_A_4(1X1T)
?
[Raw transfer]



NAD_D_9(2ZTU)
?
[Raw transfer]



NAD_C_8(2ZTU)
?
[Raw transfer]



NAD_A_5(2ZTU)
?
[Raw transfer]



NAD_C_9(2ZTV)
?
[Raw transfer]



NAD_C_17(3VDR)
?
[Raw transfer]



NAD_D_22(3VDR)
?
[Raw transfer]



NAD_B_13(3VDR)
?
[Raw transfer]



3HL_C_12(2ZTL)
?
[Raw transfer]



3HR_A_3(3W8E)
?
[Raw transfer]



3HL_B_9(2ZTL)
?
[Raw transfer]



3HR_C_19(3VDR)
?
[Raw transfer]



DXX_A_3(3W8D)
?
[Raw transfer]



MLA_A_3(3W8F)
?
[Raw transfer]
28 PsiBlast_CBE 97.5576% -99 - C1 -2Q2Q - ? -
25 PsiBlast_CBE 97.4676%-102 - C1 -2Q2Q - ? -
2 PsiBlast_PDB 96.3976%-103 - C1 -2Q2V - ? -
3 PsiBlast_PDB 96.1976%-104 - C1 -2Q2W - ? -
114 HHSearch 96.1576%-103 - C1 -2Q2V - ? -
1 PsiBlast_PDB 95.8376%-105 - C1 -2Q2Q - ? -
23 PsiBlast_CBE 95.6276%-100 - C1 -2Q2V 11.5 ?
22 PsiBlast_CBE 95.4576%-106 - C1 -2Q2V 11.4 ?
21 PsiBlast_CBE 95.3176%-106 - C1 -2Q2V 11.7 ?
29 PsiBlast_CBE 94.9876%-108 - C1 -2Q2Q - ? -
27 PsiBlast_CBE 94.8176%-100 - C1 -2Q2Q - ? -
24 PsiBlast_CBE 94.7676%-107 - C1 -2Q2Q - ? -
26 PsiBlast_CBE 93.5576%-106 - C1 -2Q2Q - ? -
8 PsiBlast_PDB 90.7259%-100 - C1 -3W8E 11.9 ?
34 PsiBlast_CBE 90.3259%-103 - C1 -3VDQ 10.4 ?
41 PsiBlast_CBE 90.0559% -98 - C1 -2YZ7 - ? -
33 PsiBlast_CBE 89.9659% -95 - C1 -3VDQ 10.1 ?
36 PsiBlast_CBE 89.8659%-104 - C1 -2YZ7 - ? -
9 PsiBlast_PDB 89.6359% -97 - C1 -3W8F 12.7 ?
35 PsiBlast_CBE 89.5659% -97 - C1 -3VDQ 10.4 ?
31 PsiBlast_CBE 89.4159% -99 - C1 -3VDR 8.3 ?
119 HHSearch 89.2561%-100 - C1 -3W8E 11.9 ?
6 PsiBlast_PDB 89.1159% -99 - C1 -3VDQ 9.9 ?
30 PsiBlast_CBE 89.0659% -93 - C1 -3VDR 8.2 ?
7 PsiBlast_PDB 89.0459%-100 - C1 -3W8D 12.3 ?
51 PsiBlast_CBE 88.6360%-103 - C1 -2ZTM 10.9 ?
32 PsiBlast_CBE 87.9759% -97 - C1 -3VDR 8.5 ?
48 PsiBlast_CBE 87.9160% -99 - C1 -2ZTL 11.4 ?
5 PsiBlast_PDB 87.7159% -96 - C1 -3VDR 7.7 ?
46 PsiBlast_CBE 87.2360% -98 - C1 -2ZTL 11.8 ?
47 PsiBlast_CBE 87.2060% -98 - C1 -2ZTL 11.7 ?
12 PsiBlast_PDB 87.1460% -97 - C1 -2ZTL 11.8 ?
43 PsiBlast_CBE 86.9660%-102 - C1 -2ZTV 10.1 ?
13 PsiBlast_PDB 86.5260% -98 - C1 -2ZTV 11.9 ?
44 PsiBlast_CBE 86.4460%-103 - C1 -2ZTV 9.8 ?
50 PsiBlast_CBE 86.3760%-101 - C1 -2ZTM 11.4 ?
15 PsiBlast_PDB 86.2560%-104 - C1 -2ZTU 9.3 ?
45 PsiBlast_CBE 86.1460%-104 - C1 -2ZTV 10.1 ?
53 PsiBlast_CBE 85.7460%-102 - C1 -2ZTU 9.3 ?
54 PsiBlast_CBE 85.4860%-102 - C1 -2ZTU 9.2 ?
11 PsiBlast_PDB 84.6060%-103 - C1 -1X1T 10.9 ?
14 PsiBlast_PDB 83.6760% -96 - C1 -2ZTM 11.3 ?
20 PsiBlast_PDB 80.4139% -98 - C1 -4DC0 12.5 ACT3_STRCO
69 PsiBlast_CBE 78.9438% -98 - C1 -1W4Z 12.4 ACT3_STRCO
75 PsiBlast_CBE 78.7038% -99 - C1 -1X7G 11.9 ACT3_STRCO
65 PsiBlast_CBE 78.5038% -97 - C1 -2RHC 12.2 ACT3_STRCO
72 PsiBlast_CBE 78.4538% -98 - C1 -1X7H 10.9 ACT3_STRCO
59 PsiBlast_CBE 78.1739% -97 - C1 -4DC0 9.0 ACT3_STRCO
68 PsiBlast_CBE 78.1238% -95 - C1 -1W4Z 12.3 ACT3_STRCO
64 PsiBlast_CBE 77.9738% -91 - C1 -2RHC 12.1 ACT3_STRCO
85 PsiBlast_CBE 77.8438% -95 - C1 -3CSD 12.1 ACT3_STRCO
83 PsiBlast_CBE 77.5538% -96 - C1 -3QRW 12.2 ACT3_STRCO
67 PsiBlast_CBE 76.9238% -96 - C1 -2RH4 12.3 ACT3_STRCO
71 PsiBlast_CBE 76.6138% -97 - C1 -1XR3 12.1 ACT3_STRCO
74 PsiBlast_CBE 76.1938% -97 - C1 -1X7G 11.0 ACT3_STRCO
78 PsiBlast_CBE 76.0038% -95 - C1 -2RHR 11.1 ACT3_STRCO
94 PsiBlast_CBE 74.1538% -94 - C1 -4DC1 11.4 ACT3_STRCO