@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1538c: (2016-05-02 )
MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLGFTSGGVRLTRTKTRPYLGDLGAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FLC_A_3(4RA9)
?
[Raw transfer]



ASP_A_5(5F52)
?
[Raw transfer]



ASP_A_2(2WT4)
ASPG_HELPJ
[Raw transfer]



DDO_B_6(1JSL)
ASPG_DICCH
[Raw transfer]



GLU_A_5(5HW0)
?
[Raw transfer]



SIN_A_5(1HG0)
ASPG_DICCH
[Raw transfer]



DDO_A_5(1JSL)
ASPG_DICCH
[Raw transfer]



DDO_C_7(1JSL)
ASPG_DICCH
[Raw transfer]



SIN_B_6(1HG0)
ASPG_DICCH
[Raw transfer]



SIN_D_8(1HG0)
ASPG_DICCH
[Raw transfer]



ASP_A_3(4NJE)
?
[Raw transfer]



SIN_C_7(1HG0)
ASPG_DICCH
[Raw transfer]



ASP_H_8(3ECA)
ASPG2_ECOLI
[Raw transfer]



GLU_D_8(1HFW)
ASPG_DICCH
[Raw transfer]



GLU_A_5(1HFW)
ASPG_DICCH
[Raw transfer]



DAS_D_8(1HG1)
ASPG_DICCH
[Raw transfer]



DAS_C_7(1HG1)
ASPG_DICCH
[Raw transfer]



ASP_E_5(1HO3)
ASPG2_ECOLI
[Raw transfer]



DAS_A_5(1HG1)
ASPG_DICCH
[Raw transfer]



GOL_A_6(4RA9)
?
[Raw transfer]



DAS_B_6(1HG1)
ASPG_DICCH
[Raw transfer]



ASP_F_6(3ECA)
ASPG2_ECOLI
[Raw transfer]



ASP_G_7(1NNS)
ASPG2_ECOLI
[Raw transfer]



GLU_B_6(1HFW)
ASPG_DICCH
[Raw transfer]



ASP_E_5(1NNS)
ASPG2_ECOLI
[Raw transfer]



GLU_C_7(1HFW)
ASPG_DICCH
[Raw transfer]



ASP_G_7(3ECA)
ASPG2_ECOLI
[Raw transfer]



ASP_G_7(1HO3)
ASPG2_ECOLI
[Raw transfer]



ASP_E_5(3ECA)
ASPG2_ECOLI
[Raw transfer]
67 HHSearch 96.8530%-117 - C10 -3NXK - ? -
3 PsiBlast_PDB 95.3628%-114 - C10 -2WLT - ASPG_HELPJ -
4 PsiBlast_PDB 95.1928%-120 - C10 -2WT4 4.4 ASPG_HELPJ
63 HHSearch 94.8427%-115 - C10 -2WLT - ASPG_HELPJ -
77 Fugue 94.3929%-115 - C10 -3ECA - ASPG2_ECOLI -
66 HHSearch 94.2828%-121 - C10 -1WSA - ASPG_WOLSU -
59 HHSearch 92.5829%-112 * C10 *1NNS - ASPG2_ECOLI -
64 HHSearch 92.4827%-111 - C10 -4PGA - ASPQ_PSES7 -
1 PsiBlast_PDB 92.4030%-120 - C10 -1WSA - ASPG_WOLSU -
68 HHSearch 92.1729%-112 - C10 -1O7J - ASPG_DICCH -
2 PsiBlast_PDB 89.2830% -99 - C10 -3NXK - ? -
61 HHSearch 88.0726%-110 - C10 -1AGX - ASPQ_ACIGL -
57 HHSearch 87.5624%-103 - C10 -2D6F - GATD_METTH -
58 HHSearch 87.5226%-106 - C10 -1ZQ1 - GATD_PYRAB -
11 PsiBlast_PDB 84.8433%-118 - C10 -5F52 3.5 ?
12 PsiBlast_PDB 84.5333%-119 - C10 -5HW0 3.9 ?
60 HHSearch 83.9223% -96 - C10 -4Q0M - ? -
65 HHSearch 82.8125%-104 - C10 -2HIM - ASPG1_ECOLI -
17 PsiBlast_PDB 82.6734%-113 - C10 -1HG1 3.7 ASPG_DICCH
38 PsiBlast_CBE 82.6234%-110 - C10 -1HG1 3.5 ASPG_DICCH
25 PsiBlast_CBE 82.1835%-118 - C10 -1NNS 3.7 ASPG2_ECOLI
39 PsiBlast_CBE 82.1734%-115 - C10 -1HG1 3.5 ASPG_DICCH
41 PsiBlast_CBE 81.9734%-112 - C10 -1HG0 3.3 ASPG_DICCH
7 PsiBlast_PDB 81.9635%-118 - C10 -1NNS 3.4 ASPG2_ECOLI
36 PsiBlast_CBE 81.9334%-113 - C10 -1JSL 3.5 ASPG_DICCH
24 PsiBlast_CBE 81.8535%-116 - C10 -3ECA 3.4 ASPG2_ECOLI
23 PsiBlast_CBE 81.8335%-118 - C10 -3ECA 3.3 ASPG2_ECOLI
22 PsiBlast_CBE 81.7035%-118 - C10 -3ECA 3.4 ASPG2_ECOLI
37 PsiBlast_CBE 81.6234%-110 - C10 -1HG1 3.7 ASPG_DICCH
6 PsiBlast_PDB 81.5935%-114 - C10 -3ECA 3.3 ASPG2_ECOLI
18 PsiBlast_PDB 81.5334%-111 - C10 -1JSL 3.5 ASPG_DICCH
35 PsiBlast_CBE 81.3134%-111 - C10 -1JSL 3.5 ASPG_DICCH
16 PsiBlast_PDB 80.8434%-111 - C10 -1HG0 3.3 ASPG_DICCH
40 PsiBlast_CBE 80.7334%-111 - C10 -1HG0 3.1 ASPG_DICCH
45 PsiBlast_CBE 80.7234%-113 - C10 -1HFW 3.8 ASPG_DICCH
44 PsiBlast_CBE 80.6834%-113 - C10 -1HFW 3.8 ASPG_DICCH
42 PsiBlast_CBE 80.6534%-112 - C10 -1HG0 3.2 ASPG_DICCH
21 PsiBlast_CBE 80.5135%-115 - C10 -1HO3 3.1 ASPG2_ECOLI
43 PsiBlast_CBE 80.4134%-114 - C10 -1HFW 3.8 ASPG_DICCH
5 PsiBlast_PDB 80.3535%-115 - C10 -1HO3 3.3 ASPG2_ECOLI
20 PsiBlast_PDB 79.8134%-112 - C10 -1HFW 3.8 ASPG_DICCH
48 PsiBlast_CBE 64.8831%-106 - C10 -4RA9 4.0 ?
51 PsiBlast_CBE 64.4431%-102 - C10 -4NJE 4.8 ?