@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1180: (2015-12-06 )
MTTVYLSLGSNIGDRETFLKQALFSIDHLQKTKVAQISAIYETAAWGNTNQEDFFNICCQVETDLAPFELLDYCQEIEKRLKRVRHEHWGPRTIDIDILLFGNQVINQEDLVVPHPYMTKRAFVLVPLLEIAPQLSLPNGSKLEDYLEKLNLGEVHYLKPVE

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A4P_A_4(1EX8)
HPPK_ECOLI
[Raw transfer]




J1D_A_2(4F7V)
HPPK_ECOLI
[Raw transfer]




J1A_A_2(3UD5)
HPPK_ECOLI
[Raw transfer]




J1B_A_2(3UDE)
HPPK_ECOLI
[Raw transfer]




J1C_A_2(3UDV)
HPPK_ECOLI
[Raw transfer]




APC_A_9(1Q0N)
HPPK_ECOLI
[Raw transfer]




APC_A_5(1F9H)
HPPK_ECOLI
[Raw transfer]




APC_A_5(4M5N)
HPPK_ECOLI
[Raw transfer]




APC_B_9(4M5N)
HPPK_ECOLI
[Raw transfer]




APC_A_3(3ILO)
HPPK_ECOLI
[Raw transfer]




APC_A_4(3HD2)
HPPK_ECOLI
[Raw transfer]




APC_A_15(1TMM)
HPPK_ECOLI
[Raw transfer]




APC_A_4(3HD1)
HPPK_ECOLI
[Raw transfer]




APC_A_2(3KUH)
HPPK_ECOLI
[Raw transfer]




ATP_A_2(1DY3)
HPPK_ECOLI
[Raw transfer]




APC_A_9(1HQ2)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5J)
HPPK_ECOLI
[Raw transfer]




APC_B_17(1TMM)
HPPK_ECOLI
[Raw transfer]




APC_A_5(4M5I)
HPPK_ECOLI
[Raw transfer]




APC_A_3(4M5M)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5L)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5K)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5H)
HPPK_ECOLI
[Raw transfer]




APC_A_2(4M5G)
HPPK_ECOLI
[Raw transfer]




APC_A_4(4CWB)
?
[Raw transfer]




APC_A_2(4CRJ)
?
[Raw transfer]




APC_B_10(1RU1)
HPPK_ECOLI
[Raw transfer]




APC_A_8(1RU1)
HPPK_ECOLI
[Raw transfer]




APC_A_3(3ILJ)
HPPK_ECOLI
[Raw transfer]




ADP_A_4(1EQM)
HPPK_ECOLI
[Raw transfer]




APC_A_5(1RU2)
HPPK_ECOLI
[Raw transfer]




AMP_A_2(1RAO)
HPPK_ECOLI
[Raw transfer]




HH2_A_2(1RB0)
HPPK_ECOLI
[Raw transfer]




PH2_A_9(2QX0)
?
[Raw transfer]




GOL_A_9(1RTZ)
HPPK_ECOLI
[Raw transfer]




GOL_A_5(3HSJ)
HPPK_ECOLI
[Raw transfer]




87Y_A_3(1DY3)
HPPK_ECOLI
[Raw transfer]




ROI_E_5(1CBK)
HPPK_HAEIN
[Raw transfer]




ROI_E_5(1CBK)
HPPK_HAEIN
[Raw transfer]




TRS_A_3(3HCX)
HPPK_ECOLI
[Raw transfer]




EDO_A_4(3UD5)
HPPK_ECOLI
[Raw transfer]




EDO_A_3(3UD5)
HPPK_ECOLI
[Raw transfer]




37 PsiBlast_CBE 95.5942%-148 - C7 -3HD2 5.3 HPPK_ECOLI
44 PsiBlast_CBE 94.6942%-147 - C7 -1G4C - HPPK_ECOLI -
62 Fugue 94.6840%-140 - C7 -1CBK 3.3 HPPK_HAEIN
29 PsiBlast_CBE 94.1742%-151 - C7 -3UDE 8.3 HPPK_ECOLI
71 HHSearch 94.0940%-138 - C7 -1CBK 3.3 HPPK_HAEIN
19 PsiBlast_PDB 93.9042%-151 - C7 -1RAO 4.5 HPPK_ECOLI
41 PsiBlast_CBE 93.8442%-143 - C7 -1KBR - HPPK_ECOLI -
16 PsiBlast_PDB 93.6942%-148 - C7 -1EQM 3.5 HPPK_ECOLI
39 PsiBlast_CBE 93.5742%-152 - C7 -3HD1 5.4 HPPK_ECOLI
28 PsiBlast_CBE 93.5642%-150 - C7 -3UDV 8.1 HPPK_ECOLI
30 PsiBlast_CBE 93.5342%-152 - C7 -3UD5 7.0 HPPK_ECOLI
56 PsiBlast_CBE 93.2942%-141 - C7 -1TMJ - HPPK_ECOLI -
26 PsiBlast_CBE 93.1143%-142 - C7 -4M5N 6.5 HPPK_ECOLI
13 PsiBlast_PDB 92.9243%-144 - C7 -4M5N 6.3 HPPK_ECOLI
8 PsiBlast_PDB 92.8643%-138 - C7 -4M5I 6.9 HPPK_ECOLI
55 PsiBlast_CBE 92.6542%-140 - C7 -1TMM 5.2 HPPK_ECOLI
9 PsiBlast_PDB 92.6143%-144 - C7 -4M5J 6.6 HPPK_ECOLI
42 PsiBlast_CBE 92.5942%-144 - C7 -1IM6 - HPPK_ECOLI -
36 PsiBlast_CBE 92.5542%-143 - C7 -3KUE - HPPK_ECOLI -
10 PsiBlast_PDB 92.5243%-141 - C7 -4M5K 7.1 HPPK_ECOLI
6 PsiBlast_PDB 92.4143%-139 - C7 -4M5G 6.7 HPPK_ECOLI
12 PsiBlast_PDB 92.3143%-144 - C7 -4M5M 7.5 HPPK_ECOLI
11 PsiBlast_PDB 92.2843%-138 - C7 -4M5L 7.0 HPPK_ECOLI
72 HHSearch 92.1938%-140 - C7 -2QX0 4.2 ?
27 PsiBlast_CBE 92.0842%-143 - C7 -4F7V 9.8 HPPK_ECOLI
53 PsiBlast_CBE 92.0342%-139 - C7 -3KUH 6.3 HPPK_ECOLI
14 PsiBlast_PDB 92.0142%-137 - C7 -1DY3 7.0 HPPK_ECOLI
59 PsiBlast_CBE 91.8140%-163 - C7 -1RU1 4.4 HPPK_ECOLI
40 PsiBlast_CBE 91.6842%-148 - C7 -3HCX 2.8 HPPK_ECOLI
54 PsiBlast_CBE 91.5742%-139 - C7 -1TMM 5.4 HPPK_ECOLI
18 PsiBlast_PDB 91.5342%-141 - C7 -1Q0N 7.1 HPPK_ECOLI
38 PsiBlast_CBE 91.3442%-152 - C7 -3HSJ 1.9 HPPK_ECOLI
58 PsiBlast_CBE 91.1540%-149 - C7 -1RU1 4.8 HPPK_ECOLI
7 PsiBlast_PDB 91.1443%-137 - C7 -4M5H 7.0 HPPK_ECOLI
43 PsiBlast_CBE 91.1342%-138 - C7 -1HQ2 6.7 HPPK_ECOLI
49 PsiBlast_CBE 90.9842%-142 - C7 -3ILJ 4.3 HPPK_ECOLI
46 PsiBlast_CBE 90.8942%-138 - C7 -1F9H 7.6 HPPK_ECOLI
47 PsiBlast_CBE 90.6542%-139 - C7 -3ILO 7.2 HPPK_ECOLI
20 PsiBlast_PDB 90.6042%-136 - C7 -1RB0 5.4 HPPK_ECOLI
15 PsiBlast_PDB 90.5442%-142 - C7 -1EX8 9.7 HPPK_ECOLI
57 PsiBlast_CBE 90.4640%-158 - C7 -1RU2 4.7 HPPK_ECOLI
60 PsiBlast_CBE 88.6240%-152 - C7 -1RTZ 2.6 HPPK_ECOLI
5 PsiBlast_PDB 86.1947%-140 - C7 -4CWB 7.3 ?
4 PsiBlast_PDB 85.4547%-139 - C7 -4CRJ 7.1 ?