@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3582c: (2016-05-21 )
MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CDM_B_7(3Q80)
ISPD_MYCTU
[Raw transfer]




CDM_A_3(3Q80)
ISPD_MYCTU
[Raw transfer]




CDM_A_3(1INI)
ISPD_ECOLI
[Raw transfer]




CDM_A_3(1INI)
ISPD_ECOLI
[Raw transfer]




CTP_B_5(3Q7U)
ISPD_MYCTU
[Raw transfer]




CDM_A_3(3Q80)
ISPD_MYCTU
[Raw transfer]




CTP_A_5(1VPA)
ISPD_THEMA
[Raw transfer]




CTP_A_5(1VPA)
ISPD_THEMA
[Raw transfer]




CTP_A_4(3Q7U)
ISPD_MYCTU
[Raw transfer]




CTP_B_6(1VPA)
ISPD_THEMA
[Raw transfer]




C5P_A_3(2XWM)
?
[Raw transfer]




C5P_B_4(2XWM)
?
[Raw transfer]




CTP_B_6(2XWN)
ISPD_MYCTU
[Raw transfer]




CTP_A_4(2XWL)
?
[Raw transfer]




CTP_D_16(4ZDQ)
ISPD_BURTA
[Raw transfer]




CTP_B_6(2XWL)
?
[Raw transfer]




CTP_A_4(2XWL)
?
[Raw transfer]




CTP_A_4(1I52)
ISPD_ECOLI
[Raw transfer]




CTP_A_5(4ZDQ)
ISPD_BURTA
[Raw transfer]




CTP_A_4(1I52)
ISPD_ECOLI
[Raw transfer]




CTP_A_4(1I52)
ISPD_ECOLI
[Raw transfer]




CTP_A_5(4ZDQ)
ISPD_BURTA
[Raw transfer]




C_A_4(1W55)
ISPDF_CAMJE
[Raw transfer]




PGO_A_3(3N9W)
ISPD_ECOLI
[Raw transfer]




PGR_B_5(3N9W)
ISPD_ECOLI
[Raw transfer]




C5P_A_7(1W77)
ISPD_ARATH
[Raw transfer]




30A_A_7(2YCM)
ISPD_ARATH
[Raw transfer]




6BC_A_2(2YC5)
ISPD_ARATH
[Raw transfer]




MW5_A_2(2YC3)
ISPD_ARATH
[Raw transfer]




PBQ_A_2(4NAK)
ISPD_ARATH
[Raw transfer]




H70_A_2(4NAL)
ISPD_ARATH
[Raw transfer]




ACY_B_8(1VPA)
ISPD_THEMA
[Raw transfer]




ACY_A_7(1VPA)
ISPD_THEMA
[Raw transfer]




23 PsiBlast_CBE 97.8599%-138 - C2 -3Q7U 7.7 ISPD_MYCTU
2 PsiBlast_PDB 97.7499%-137 - C2 -3Q7U 7.8 ISPD_MYCTU
3 PsiBlast_PDB 96.1899%-137 - C2 -3Q80 7.5 ISPD_MYCTU
22 PsiBlast_CBE 95.5299%-134 - C2 -3Q80 7.0 ISPD_MYCTU
24 PsiBlast_CBE 94.6099%-135 - C2 -2XWN 8.0 ISPD_MYCTU
62 HHSearch 92.6496%-132 - C2 -3Q80 7.1 ISPD_MYCTU
21 PsiBlast_CBE 92.59100%-137 - C2 -3OKR - ISPD_MYCTU -
1 PsiBlast_PDB 90.44100%-141 - C2 -3OKR - ISPD_MYCTU -
65 HHSearch 81.3762%-129 - C2 -2XWL 7.4 ?
5 PsiBlast_PDB 79.9062%-119 - C2 -2XWM 5.5 ?
4 PsiBlast_PDB 79.6362%-123 - C2 -2XWL 7.4 ?
25 PsiBlast_CBE 79.2662%-122 - C2 -2XWM 5.2 ?
26 PsiBlast_CBE 78.2062%-122 - C2 -2XWL 7.7 ?
63 HHSearch 72.5429%-121 - C2 -4CVH - ISPD_HUMAN -
53 Fugue 71.8629%-121 - C2 -4CVH - ISPD_HUMAN -
6 PsiBlast_PDB 70.9834%-127 - C2 -1VPA 6.7 ISPD_THEMA
27 PsiBlast_CBE 70.8534%-126 - C2 -1VPA 6.9 ISPD_THEMA
72 HHSearch 70.0334%-120 * C2 *1VPA 6.7 ISPD_THEMA
17 PsiBlast_PDB 68.7029%-119 - C2 -4CVH - ISPD_HUMAN -
61 HHSearch 66.6829%-121 - C2 -2YC3 - ISPD_ARATH -
28 PsiBlast_CBE 63.3335%-110 - C2 -4ZDQ 2.4 ISPD_BURTA
41 PsiBlast_CBE 62.0331%-117 - C2 -2YC3 7.5 ISPD_ARATH
9 PsiBlast_PDB 61.9835% -98 - C2 -4ZDQ 7.2 ISPD_BURTA
13 PsiBlast_PDB 61.5932%-114 - C2 -3N9W 4.2 ISPD_ECOLI
66 HHSearch 61.3132%-102 - C2 -4ZDQ 7.2 ISPD_BURTA
14 PsiBlast_PDB 61.2532%-106 - C2 -1I52 6.7 ISPD_ECOLI
64 HHSearch 60.6832%-105 - C2 -1I52 6.7 ISPD_ECOLI
39 PsiBlast_CBE 60.6831%-123 - C2 -4NAK 5.9 ISPD_ARATH
16 PsiBlast_PDB 60.6732%-102 - C2 -1INI 7.1 ISPD_ECOLI
51 Fugue 60.1331%-101 - C2 -1INI 7.1 ISPD_ECOLI
52 Fugue 59.7831%-104 - C2 -1I52 6.7 ISPD_ECOLI
36 PsiBlast_CBE 59.7531%-119 - C2 -2YCM 7.2 ISPD_ARATH
40 PsiBlast_CBE 59.6231%-120 - C2 -2YC5 7.2 ISPD_ARATH
38 PsiBlast_CBE 59.3631%-119 - C2 -4NAL 5.9 ISPD_ARATH
35 PsiBlast_CBE 59.1332% -99 - C2 -3N9W 4.1 ISPD_ECOLI
43 PsiBlast_CBE 57.6031%-116 - C2 -1W77 3.1 ISPD_ARATH