Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000804 (Helicobacter pylori - Dec 2015)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
200jhp_020263 36% 0.463 PF13288 C6_S1123 - (58)20 27 / 12 / 21 12
201jhp_020316 20% 0.254 PF00535 13 - (7)? - / - / - 0
202jhp_02047 91% 0.495 PF01161 4 - (0)1 - / - / - 0
203jhp_02057 33% 0.407 PF00046 7 - (0)? - / - / - 0
204jhp_020629 44% 0.528 PF00266 C2_S153 - (40)4 - / - / 17 1
205jhp_020717 38% 0.499 PF01592 5 - (0)? - / - / - 0
206jhp_020815 100% 0.469 PF01248 4 - (0)? - / - / - 0
207jhp_020915 45% 0.444 PF08423 11 - (0)? - / - / - 0
208jhp_021024 61% 0.502 PF01641 C4_S113 - (0)4 - / - / 6 0
209jhp_02110 38% 0.081 PF05371 3 - (0)? - / - / - 0
210jhp_02124 41% 0.558 PF00294 10 - (0)? - / - / - 0
211jhp_02133 42% 0.383 PF00046 C6_S19 - (0)1 - / - / 2 1
212jhp_02140 48% 0.269 PF08913 1 - (0)? - / - / - 0
213jhp_021529 40% 0.513 PF02348 C1_S148 - (36)10 - / 8 / 7 4
214jhp_021618 98% 0.689 PF13098 6 - (0)? - / - / - 0
215jhp_02170 44% 0.084 PF01116 3 - (3)? - / - / - 0
216jhp_021814 24% 0.402 PF03738 31 - (20)? - / - / - 0
217jhp_02190 35% 0.349 PF00536 0 - (0)? - / - / - 0
218jhp_022016 38% 0.423 PF13181 25 - (0)? - / - / - 0
219jhp_022113 31% 0.632 PF13442 43 - (0)? - / - / - 0
220jhp_022215 46% 0.501 PF03900 C4_S125 - (7)4 3 / 7 / 1 2
221jhp_022320 44% 0.461 PF00587 C1_S121 - (16)? 2 / - / - 0
222jhp_022413 34% 0.575 PF08501 C4_S126 - (17)2 - / - / 1 0
223jhp_022520 96% 0.599 PF00348 C1_S112 - (7)3 - / - / 3 1
224jhp_02260 31% 0.345 PF08241 1 - (0)? - / - / - 0
225jhp_02275 96% 0.512 PF03816 2 - (0)? - / - / - 0
226jhp_022826 98% 0.688 PF00210 C3_S111 - (0)4 - / - / 2 0
227jhp_022911 35% 0.504 PF00512 27 - (24)? - / - / - 0
228jhp_02300 40% 0.261 PF01984 0 - (0)? - / - / - 0
229jhp_02310 53% 0.022 PF05552 1 - (0)? - / - / - 0
230jhp_023247 44% 0.729 PF00271 C3_S161 - (0)12 1 / 13 / 23 6
231jhp_02333 26% 0.247 PF01145 0 - (0)? - / - / - 0
232jhp_02340 41% 0.327 PF02446 2 - (0)? - / - / - 0
233jhp_023522 37% 0.498 PF00005 C3_S138 - (0)5 - / - / 5 3
234jhp_02364 29% 0.069 PF00528 2 - (0)? - / - / - 0
235jhp_02370 24% 0.130 PF01389 6 - (0)? - / - / - 0
236jhp_02380 17% 0.132 PF01389 9 - (0)? - / - / - 0
237jhp_023942 53% 0.506 PF00709 C4_S170 - (52)18 - / 31 / 10 7
238jhp_02402 43% 0.620 PF00010 0 - (0)? - / - / - 0
239jhp_02418 38% 0.489 PF03448 0 - (0)? - / - / - 0
240jhp_02426 43% 0.537 PF02163 4 - (0)? - / - / - 0
241jhp_02436 27% 0.446 PF01336 2 - (0)? - / - / - 0
242jhp_02449 39% 0.421 PF01555 9 - (9)? - / - / - 0
243jhp_02450 19% 0.172 PF02352 0 - (0)? - / - / - 0
244jhp_02461 39% 0.249 PF07714 8 - (0)? - / - / - 0
245jhp_02470 37% 0.218 PF01193 1 - (0)? - / - / - 0
246jhp_02488 45% 0.385 PF01555 6 - (6)? - / - / - 0
247jhp_024913 57% 0.604 PF10431 C4_S113 - (0)6 - / 11 / - 3
248jhp_02500 21% 0.340 -0 - (0)? - / - / - 0
249jhp_025116 27% 0.432 PF01979 6 - (3)? - / - / - 0
250jhp_025215 37% 0.446 PF01979 C1_S117 - (11)2 - / - / 2 1

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