@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0355: (2015-11-30 )
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR

Atome Classification :

(62 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DUP_C_8(2OKE)
?
[Raw transfer]




UMP_C_5(2OL1)
?
[Raw transfer]




DUD_B_6(1Q5H)
DUT_HUMAN
[Raw transfer]




DUP_B_7(3P48)
DUT_YEAST
[Raw transfer]




UMP_C_5(2OL1)
?
[Raw transfer]




DUP_B_11(3EHW)
DUT_HUMAN
[Raw transfer]




DUP_A_8(3EHW)
DUT_HUMAN
[Raw transfer]




DUP_B_8(4OOP)
DUT_ARATH
[Raw transfer]




EDO_B_12(3MBQ)
DUT_BRUA2
[Raw transfer]




EDO_A_7(3MBQ)
DUT_BRUA2
[Raw transfer]




DUP_Y_18(3EHW)
DUT_HUMAN
[Raw transfer]




DUP_C_12(3EHW)
DUT_HUMAN
[Raw transfer]




DUP_B_7(2OKE)
?
[Raw transfer]




DUP_X_15(3EHW)
DUT_HUMAN
[Raw transfer]




DUP_C_11(2HQU)
DUT_HUMAN
[Raw transfer]




DUD_C_7(1Q5H)
DUT_HUMAN
[Raw transfer]




UMP_A_4(3F4F)
DUT_YEAST
[Raw transfer]




DUD_A_5(1Q5H)
DUT_HUMAN
[Raw transfer]




DUP_A_4(4OOP)
DUT_ARATH
[Raw transfer]




DUD_B_10(3C3I)
?
[Raw transfer]




DUP_B_7(4OOP)
DUT_ARATH
[Raw transfer]




DUP_B_11(1SJN)
DUT_MYCTU
[Raw transfer]




DUD_B_9(3C3I)
?
[Raw transfer]




DUD_C_8(2OL0)
?
[Raw transfer]




DUD_B_8(3C3I)
?
[Raw transfer]




DUP_A_4(3P48)
DUT_YEAST
[Raw transfer]




GOL_C_18(3MBQ)
DUT_BRUA2
[Raw transfer]




DUP_B_6(3P48)
DUT_YEAST
[Raw transfer]




UMP_C_5(2OL1)
?
[Raw transfer]




UMP_C_5(2OL1)
?
[Raw transfer]




UMP_C_9(3F4F)
DUT_YEAST
[Raw transfer]




UMP_B_6(3F4F)
DUT_YEAST
[Raw transfer]




PEG_C_10(3F4F)
DUT_YEAST
[Raw transfer]




MSJ_A_4(3ARN)
DUT_HUMAN
[Raw transfer]




MSJ_B_8(3ARN)
DUT_HUMAN
[Raw transfer]




MSJ_C_11(3ARN)
DUT_HUMAN
[Raw transfer]




DUP_A_3(3HZA)
DUT_MYCTU
[Raw transfer]




EDO_B_9(2OKB)
?
[Raw transfer]




UMP_C_9(3F4F)
DUT_YEAST
[Raw transfer]




EDO_B_7(2OKD)
?
[Raw transfer]




EDO_A_6(2OKD)
?
[Raw transfer]




EDO_A_2(3MDX)
DUT_BRUA2
[Raw transfer]




UMP_A_2(3TQ5)
?
[Raw transfer]




DUP_B_6(3P48)
DUT_YEAST
[Raw transfer]




DUD_A_5(3C2T)
?
[Raw transfer]




DUD_A_5(3CA9)
?
[Raw transfer]




DUD_C_6(2OL0)
?
[Raw transfer]




DUP_C_8(2OKE)
?
[Raw transfer]




DUD_C_8(2OL0)
?
[Raw transfer]




MKH_C_8(3ARA)
DUT_HUMAN
[Raw transfer]




MKH_A_4(3ARA)
DUT_HUMAN
[Raw transfer]




MKH_B_6(3ARA)
DUT_HUMAN
[Raw transfer]




MKH_B_6(3ARA)
DUT_HUMAN
[Raw transfer]




DU3_C_9(3T64)
?
[Raw transfer]




EDO_B_7(2OKD)
?
[Raw transfer]




124 HHSearch 90.4657%-129 - C3 -3MDX 3.0 DUT_BRUA2
21 PsiBlast_CBE 87.9358%-123 - C3 -3MBQ 3.0 DUT_BRUA2
2 PsiBlast_PDB 84.8258%-124 - C3 -3MDX - DUT_BRUA2 -
22 PsiBlast_CBE 84.4758%-125 - C3 -3MBQ 1.8 DUT_BRUA2
127 HHSearch 83.7445%-129 - C3 -3HZA 3.3 DUT_MYCTU
130 HHSearch 81.8443%-149 - C3 -3LQW - ? -
134 HHSearch 81.4131%-147 - C3 -3ZF6 - ? -
123 HHSearch 81.2845%-137 - C3 -1SJN 3.3 DUT_MYCTU
1 PsiBlast_PDB 81.1958%-119 - C3 -3MBQ 2.5 DUT_BRUA2
4 PsiBlast_PDB 78.0944%-114 - C3 -3TQZ - DUT_COXBU -
100 PsiBlast_CBE 77.3142%-117 - C3 -4OOP 3.4 DUT_ARATH
90 PsiBlast_CBE 76.9238%-107 - C3 -3F4F 3.3 DUT_YEAST
144 Fugue 76.5439%-116 - C3 -1DUP - DUT_ECOLI -
91 PsiBlast_CBE 76.4238%-105 - C3 -3F4F 3.3 DUT_YEAST
5 PsiBlast_PDB 75.9541%-122 - C3 -1DUP - DUT_ECOLI -
135 HHSearch 75.7142%-149 - C3 -3CA9 3.2 ?
7 PsiBlast_PDB 75.5641%-121 - C3 -1DUD - DUT_ECOLI -
132 HHSearch 75.4438%-133 - C3 -3F4F 2.4 DUT_YEAST
8 PsiBlast_PDB 75.4241%-121 - C3 -2HR6 - DUT_ECOLI -
92 PsiBlast_CBE 75.3738%-108 * C3 *3F4F 3.2 DUT_YEAST
63 PsiBlast_CBE 75.0638%-116 - C3 -3P48 4.7 DUT_YEAST
41 PsiBlast_CBE 74.7342%-114 - C3 -3EHW 4.2 DUT_HUMAN
39 PsiBlast_CBE 74.5542%-110 - C3 -3EHW 3.9 DUT_HUMAN
36 PsiBlast_CBE 74.4142%-111 - C3 -3EHW 3.5 DUT_HUMAN
125 HHSearch 73.0542%-142 - C3 -3C2T 2.7 ?
24 PsiBlast_CBE 73.0342%-121 - C3 -1Q5H 3.1 DUT_HUMAN
40 PsiBlast_CBE 72.9142%-111 - C3 -3EHW 4.1 DUT_HUMAN
37 PsiBlast_CBE 72.8842%-109 - C3 -3EHW 3.8 DUT_HUMAN
48 PsiBlast_CBE 72.8342%-110 - C3 -2HQU 3.8 DUT_HUMAN
23 PsiBlast_CBE 72.8242%-122 - C3 -1Q5H 2.5 DUT_HUMAN
65 PsiBlast_CBE 72.8138%-106 - C3 -3P48 3.1 DUT_YEAST
121 HHSearch 71.4436%-132 - C3 -3ARA 3.5 DUT_HUMAN
128 HHSearch 71.3538%-130 - C3 -3P48 3.9 DUT_YEAST
64 PsiBlast_CBE 71.2538%-109 - C3 -3P48 3.4 DUT_YEAST
101 PsiBlast_CBE 71.0442%-119 - C3 -4OOP 3.7 DUT_ARATH
56 PsiBlast_CBE 70.6642%-118 - C3 -3C3I 4.4 ?
99 PsiBlast_CBE 70.5442%-119 - C3 -4OOP 3.4 DUT_ARATH
55 PsiBlast_CBE 70.3742%-115 - C3 -3C3I 2.8 ?
45 PsiBlast_CBE 68.4642%-123 - C3 -3ARA 3.3 DUT_HUMAN
46 PsiBlast_CBE 67.9942%-126 - C3 -3ARA 3.2 DUT_HUMAN
42 PsiBlast_CBE 67.7242%-121 - C3 -3ARN 2.8 DUT_HUMAN
43 PsiBlast_CBE 67.4942%-121 - C3 -3ARN 4.1 DUT_HUMAN
11 PsiBlast_PDB 67.1142%-124 - C3 -1Q5H 3.3 DUT_HUMAN
47 PsiBlast_CBE 67.0342%-121 - C3 -3ARA 3.5 DUT_HUMAN
133 HHSearch 67.0038%-125 - C3 -2OL1 4.7 ?
44 PsiBlast_CBE 66.7042%-120 - C3 -3ARN 2.7 DUT_HUMAN
54 PsiBlast_CBE 66.3742%-123 - C3 -3C3I 4.3 ?
136 HHSearch 65.2630% -95 - C3 -3T64 2.6 ?
140 HHSearch 61.5034%-146 - C3 -3TQ5 3.9 ?
116 PsiBlast_CBE 58.6138%-112 - C3 -2OKD 2.7 ?
104 PsiBlast_CBE 58.5038%-119 - C3 -2OKB 3.0 ?
105 PsiBlast_CBE 57.7838%-118 - C3 -2OL1 5.6 ?
110 PsiBlast_CBE 57.5338%-111 - C3 -2OL0 3.5 ?
113 PsiBlast_CBE 57.4938%-109 - C3 -2OKE 2.9 ?
106 PsiBlast_CBE 57.2638%-117 - C3 -2OL1 5.0 ?
109 PsiBlast_CBE 57.2338%-114 - C3 -2OL0 3.1 ?
108 PsiBlast_CBE 57.0138%-112 - C3 -2OL0 3.3 ?
107 PsiBlast_CBE 56.8138%-113 - C3 -2OL1 4.7 ?
111 PsiBlast_CBE 56.6438%-115 - C3 -2OKE 3.3 ?
114 PsiBlast_CBE 55.1338%-112 - C3 -2OKD 2.8 ?
112 PsiBlast_CBE 54.8438%-111 - C3 -2OKE 3.2 ?
115 PsiBlast_CBE 54.4238%-118 - C3 -2OKD 3.0 ?