@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0180: (2015-12-13 )
MTKIAMANFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKGFRAVKEFLSEQLENIDLNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL

Atome Classification :

(59 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G3P_B_5(3UWU)
TPIS_STAAR
[Raw transfer]




3PG_A_3(2VFH)
TPIS_PLAFA
[Raw transfer]




G3P_A_3(3UWU)
TPIS_STAAR
[Raw transfer]




PGH_A_2(2VXN)
TPIS_LEIME
[Raw transfer]




PGH_A_3(3YPI)
TPIS_YEAST
[Raw transfer]




PGH_A_3(3TAO)
TPIS_MYCTU
[Raw transfer]




G2H_A_3(3UWZ)
TPIS_STAAR
[Raw transfer]




PGA_B_4(2YPI)
TPIS_YEAST
[Raw transfer]




PGH_B_4(7TIM)
TPIS_YEAST
[Raw transfer]




129_C_3(1IF2)
TPIS_LEIME
[Raw transfer]




PGA_A_3(2J27)
TPIS_TRYBB
[Raw transfer]




PGA_A_2(1LYX)
TPIS_PLAFA
[Raw transfer]




G2H_B_5(3UWZ)
TPIS_STAAR
[Raw transfer]




3PG_C_3(1M7O)
TPIS_PLAFA
[Raw transfer]




PGH_A_3(7TIM)
TPIS_YEAST
[Raw transfer]




3PG_A_3(2VFI)
TPIS_PLAFA
[Raw transfer]




PGA_A_3(4FF7)
TPIS_YEAST
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




3PG_B_4(2VFH)
TPIS_PLAFA
[Raw transfer]




3PG_B_6(3UWW)
TPIS_STAAR
[Raw transfer]




PGA_A_3(2YPI)
TPIS_YEAST
[Raw transfer]




3PG_D_4(1M7O)
TPIS_PLAFA
[Raw transfer]




PGA_D_4(1SW3)
TPIS_CHICK
[Raw transfer]




3PG_B_5(2VFI)
TPIS_PLAFA
[Raw transfer]




PGA_E_5(1LZO)
TPIS_PLAFA
[Raw transfer]




PGH_B_4(3YPI)
TPIS_YEAST
[Raw transfer]




PGA_F_6(1LZO)
TPIS_PLAFA
[Raw transfer]




PGA_C_3(1SW3)
TPIS_CHICK
[Raw transfer]




3PG_A_4(3UWW)
TPIS_STAAR
[Raw transfer]




G3H_D_4(1M7P)
TPIS_PLAFA
[Raw transfer]




GOL_A_4(2VFE)
TPIS_PLAFA
[Raw transfer]




3PY_A_4(1O5X)
TPIS_PLAFA
[Raw transfer]




GOL_B_6(2VFE)
TPIS_PLAFA
[Raw transfer]




2PG_A_5(3UWV)
TPIS_STAAR
[Raw transfer]




G3H_C_3(1M7P)
TPIS_PLAFA
[Raw transfer]




GOL_A_3(4HHP)
?
[Raw transfer]




3PY_A_4(1O5X)
TPIS_PLAFA
[Raw transfer]




PEG_B_9(4MVA)
?
[Raw transfer]




GOL_A_3(3GVG)
TPIS_MYCTU
[Raw transfer]




EDO_A_4(3PSV)
TPIS_PLAFA
[Raw transfer]




2PG_B_5(1O5X)
TPIS_PLAFA
[Raw transfer]




2PG_B_7(3UWV)
TPIS_STAAR
[Raw transfer]




EDO_A_4(4ZZ9)
?
[Raw transfer]




EDO_A_3(3PSW)
TPIS_PLAFA
[Raw transfer]




UVW_A_4(4MVA)
?
[Raw transfer]




EDO_B_7(4ZZ9)
?
[Raw transfer]




CIT_B_5(3M9Y)
TPIS_STAAR
[Raw transfer]




GOL_B_13(4FF7)
TPIS_YEAST
[Raw transfer]




GOL_B_5(3GVG)
TPIS_MYCTU
[Raw transfer]




EDO_B_7(3PSW)
TPIS_PLAFA
[Raw transfer]




GOL_A_7(2VXN)
TPIS_LEIME
[Raw transfer]




MRD_A_2(4MKN)
?
[Raw transfer]




21 PsiBlast_CBE 84.2894% -54 - C- -2JGQ - TPIS_HELPY -
121 HHSearch 83.9895% -56 - C- -2JGQ - TPIS_HELPY -
1 PsiBlast_PDB 83.7494% -56 - C- -2JGQ - TPIS_HELPY -
65 PsiBlast_CBE 79.7931%-103 - C9 -3UWW 3.6 TPIS_STAAR
67 PsiBlast_CBE 79.1531%-103 - C9 -3UWV 2.0 TPIS_STAAR
63 PsiBlast_CBE 79.0631%-104 - C9 -3UWZ 2.2 TPIS_STAAR
71 PsiBlast_CBE 78.9331%-107 - C9 -3M9Y - TPIS_STAAR -
64 PsiBlast_CBE 78.8131% -99 - C9 -3UWW 3.4 TPIS_STAAR
66 PsiBlast_CBE 78.4931%-103 - C9 -3UWV 2.9 TPIS_STAAR
69 PsiBlast_CBE 78.4731%-102 - C9 -3UWU 4.5 TPIS_STAAR
68 PsiBlast_CBE 78.4431%-101 - C9 -3UWU 4.3 TPIS_STAAR
62 PsiBlast_CBE 78.3231%-105 - C9 -3UWZ 2.7 TPIS_STAAR
70 PsiBlast_CBE 78.2931%-103 - C9 -3M9Y 3.3 TPIS_STAAR
5 PsiBlast_PDB 77.6433% -95 - C9 -1YYA - TPIS_THET8 -
18 PsiBlast_PDB 77.0131% -90 - C9 -4MKN 2.7 ?
27 PsiBlast_CBE 76.9833% -96 - C9 -1YYA - TPIS_THET8 -
86 PsiBlast_CBE 75.7433%-105 - C9 -4HHP 3.5 ?
45 PsiBlast_CBE 75.3233%-109 - C9 -1CI1 - TPIS_TRYCR -
101 Fugue 75.0634% -94 - C9 -1YPI - TPIS_YEAST -
112 HHSearch 74.8232% -89 - C9 -1YYA - TPIS_THET8 -
7 PsiBlast_PDB 72.8431% -92 - C9 -3GVG 2.3 TPIS_MYCTU
123 HHSearch 72.8332% -89 - C9 -2VXN 4.5 TPIS_LEIME
102 Fugue 72.2431% -98 - C9 -1IF2 4.5 TPIS_LEIME
9 PsiBlast_PDB 72.2031% -91 - C9 -3TAO 4.2 TPIS_MYCTU
28 PsiBlast_CBE 71.8331% -90 - C9 -3GVG 2.9 TPIS_MYCTU
115 HHSearch 71.7231% -88 - C9 -1O5X 3.2 TPIS_PLAFA
117 HHSearch 71.0331% -97 - C9 -2J27 2.9 TPIS_TRYBB
59 PsiBlast_CBE 70.8135% -87 - C9 -2VFH 3.4 TPIS_PLAFA
89 PsiBlast_CBE 70.4835% -98 - C9 -3PSV 3.2 TPIS_PLAFA
58 PsiBlast_CBE 70.3135% -87 - C9 -2VFH 3.1 TPIS_PLAFA
77 PsiBlast_CBE 69.9635% -88 - C9 -1O5X 2.9 TPIS_PLAFA
78 PsiBlast_CBE 69.4935% -90 - C9 -1M7P 3.4 TPIS_PLAFA
84 PsiBlast_CBE 69.4635% -85 - C9 -1LYX 3.0 TPIS_PLAFA
39 PsiBlast_CBE 69.3736% -88 - C9 -2VFE 2.6 TPIS_PLAFA
74 PsiBlast_CBE 69.2435% -89 - C9 -2VFI 2.9 TPIS_PLAFA
87 PsiBlast_CBE 69.0135% -91 - C9 -3PSW 2.1 TPIS_PLAFA
81 PsiBlast_CBE 68.9735% -90 - C9 -1M7O 2.5 TPIS_PLAFA
88 PsiBlast_CBE 68.6735% -89 - C9 -3PSW 3.2 TPIS_PLAFA
93 PsiBlast_CBE 68.3435% -95 - C9 -4ZZ9 3.1 ?
82 PsiBlast_CBE 68.1435% -88 - C9 -1LZO 2.3 TPIS_PLAFA
92 PsiBlast_CBE 68.1135% -90 * C9 *4ZZ9 3.1 ?
76 PsiBlast_CBE 68.0835% -86 - C9 -1O5X 2.8 TPIS_PLAFA
38 PsiBlast_CBE 68.0636% -89 - C9 -2VFE 2.2 TPIS_PLAFA
79 PsiBlast_CBE 68.0535% -91 - C9 -1M7P 2.5 TPIS_PLAFA
32 PsiBlast_CBE 67.9837% -79 - C9 -7TIM 3.3 TPIS_YEAST
12 PsiBlast_PDB 67.7735% -88 - C9 -4MVA 2.6 ?
75 PsiBlast_CBE 67.4935% -84 - C9 -2VFI 3.2 TPIS_PLAFA
31 PsiBlast_CBE 67.1835% -89 - C9 -4MVA 2.7 ?
83 PsiBlast_CBE 67.1035% -92 - C9 -1LZO 2.5 TPIS_PLAFA
49 PsiBlast_CBE 67.0536% -82 - C9 -4FF7 2.4 TPIS_YEAST
50 PsiBlast_CBE 66.9736% -81 - C9 -4FF7 2.3 TPIS_YEAST
80 PsiBlast_CBE 66.6535% -84 - C9 -1M7O 3.7 TPIS_PLAFA
42 PsiBlast_CBE 66.3136% -87 - C9 -3YPI 2.6 TPIS_YEAST
16 PsiBlast_PDB 65.9337% -74 - C9 -7TIM 3.2 TPIS_YEAST
15 PsiBlast_PDB 65.7737% -78 - C9 -2YPI 3.2 TPIS_YEAST
41 PsiBlast_CBE 65.0536% -83 - C9 -3YPI 2.7 TPIS_YEAST
33 PsiBlast_CBE 62.5737% -77 - C9 -2YPI 3.5 TPIS_YEAST
90 PsiBlast_CBE 62.1535% -74 - C9 -1SW3 3.2 TPIS_CHICK
91 PsiBlast_CBE 60.8335% -76 - C9 -1SW3 3.3 TPIS_CHICK