Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




 Query Sequence
Filter: 		Significants
SA found		 Seq Ident. 3D Core
(QMean Score)		 Modeller
(QMean Score)		 Classification code

 Binding Site (All) Ligands Found
(Procognate)		 Profile Complexes by comparative docking
(ligands from PDB templates)

 Targets
for screening


Sort by entries

 [Nb of SA]
 [Best Ident]
 [Best Score]
 [Best Score]
 Main Code
 [Name]
 [Number]
 [Number]
 Distribution of CDocking pKd
 [Number]
250548_tII_HYAOR12 42% 0.649 0.687 PF00234 0 - (0)- - / - / - -
251547_tII_HORVU12 54% 0.481 0.483 PF00234 C3_S11 - (0)- - / - / 1 -
252546_tII_HORVU12 73% 0.577 0.578 PF00234 C4_S11 - (0)- - / 1 / - -
253545_tII_BRACM12 48% 0.663 0.664 PF00234 0 - (0)- - / - / - -
254544_tII_TAMHI12 51% 0.571 0.568 PF00234 0 - (0)- - / - / - -
255543_tII_TAMHI11 43% 0.703 0.703 PF14368 0 - (0)- - / - / - -
256542_tII_TAMHI12 41% 0.616 0.648 PF14368 0 - (0)- - / - / - -
257541_tII_POPTR12 40% 0.771 0.772 PF00234 0 - (0)- - / - / - -
258540_tII_POPTR12 41% 0.707 0.758 PF00234 0 - (0)- - / - / - -
259539_tII_POPTR12 43% 0.671 0.692 PF00234 0 - (0)- - / - / - -
260538_tII_POPTR12 46% 0.641 0.640 PF00234 0 - (0)- - / - / - -
261537_tII_MEDTR12 40% 0.724 0.724 PF00234 0 - (0)- - / - / - -
262536_tII_MAIZE12 37% 0.576 0.640 PF00234 0 - (0)- - / - / - -
263535_tII_MAIZE12 63% 0.659 0.704 PF00234 C2_S11 - (0)- - / 1 / - -
264534_tII_MAIZE12 53% 0.559 0.560 PF00234 0 - (0)- - / - / - -
265533_tII_GOSHI12 39% 0.386 0.483 PF00234 0 - (0)- - / - / - -
266532_tII_MAIZE12 38% 0.591 0.611 PF00234 0 - (0)- - / - / - -
267531_tII_PICSI12 42% 0.753 0.711 PF14368 0 - (0)- - / - / - -
268530_tII_ORYSI12 51% 0.543 0.565 PF00234 C4_S11 - (0)- - / - / 1 -
269529_tII_ORYSI12 97% 0.599 0.581 PF00234 C3_S11 - (0)- - / 1 / - -
270528_tI_TOBAC11 42% 0.587 0.567 PF00234 C3_S11 - (0)- - / - / 1 -
271527_tI_WHEAT10 60% 0.573 0.573 PF00234 C5_S12 - (0)- - / - / 1 -
272525_tI_WHEAT9 66% 0.564 0.565 PF00234 C4_S13 - (0)- - / 1 / 2 -
273524_tI_ORYSJ9 59% 0.630 0.687 PF00234 C3_S12 - (0)- - / - / 2 -
274523_tI_GOSHI9 66% 0.520 0.533 PF00234 C2_S13 - (0)- - / - / 3 -
275522_tI_ORYSA10 75% 0.533 0.544 PF00234 C2_S14 - (0)- - / 2 / 2 -
276521_tI_ORYSA9 78% 0.554 0.470 PF00234 C2_S14 - (0)- - / 1 / 3 -
277520_tI_CHIPR8 61% 0.665 0.650 PF00234 C2_S12 - (0)- - / - / 2 -
278519_tI_TAMHI10 58% 0.397 0.493 PF00234 C4_S14 - (0)- - / 1 / 3 -
279518_tI_TAMHI11 65% 0.603 0.645 PF00234 C5_S13 - (0)- - / - / 3 -
280517_tI_POPTR7 46% 0.689 0.739 PF00234 1 - (0)- - / - / - -
281516_tI_POPTR8 47% 0.701 0.746 PF00234 0 - (0)- - / - / - -
282515_tI_POPTR8 54% 0.521 0.494 PF00234 C2_S12 - (0)- - / - / 2 -
283514_tI_POPTR10 38% 0.529 0.576 PF00234 1 - (0)- - / - / - -
284513_tI_POPTR7 48% 0.771 0.769 PF00234 1 - (0)- - / - / - -
285512_tI_CASMO8 64% 0.647 0.652 PF00234 C1_S14 - (0)- - / 1 / 3 -
286511_tI_PRUDP9 100% 0.549 0.601 PF00234 C2_S12 - (0)- - / - / 2 -
287510_tI_PRUDP8 95% 0.618 0.604 PF00234 C2_S13 - (0)- - / 1 / 2 -
288509_tI_BRAJU10 46% 0.609 0.635 PF00234 C2_S12 - (0)- - / - / 1 -
289508_tI_WHEAT11 70% 0.587 0.589 PF00234 C4_S13 - (0)- - / 1 / 1 -
290507_tVI_MAIZE9 34% 0.492 0.557 PF00234 0 - (0)- - / - / - -
291506_tIV_MAIZE16 44% 0.477 0.446 PF00234 0 - (0)- - / - / - -
292505_tIV_MAIZE12 51% 0.506 0.529 PF00234 C2_S11 - (0)- - / - / 1 -
293504_tIV_ANACO9 54% 0.454 0.549 PF00234 C5_S12 - (0)- - / 1 / 1 -
294503_tVI_BRANA9 29% 0.465 0.467 PF00234 0 - (0)- - / - / - -
295502_tVI_SETIT10 40% 0.436 0.517 PF00234 0 - (0)- - / - / - -
296501_tIV_MEDTR11 37% 0.527 0.605 PF00234 0 - (0)- - / - / - -
297500_tIV_PICSI10 42% 0.482 0.455 PF00234 0 - (0)- - / - / - -
298499_tIV_JATCU14 45% 0.535 0.542 PF00234 0 - (0)- - / - / - -
299498_tIV_RICCO11 34% 0.553 0.554 PF00234 0 - (0)- - / - / - -
300497_tIV_RICCO14 48% 0.559 0.515 PF00234 C3_S11 - (0)- - / - / 1 -

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