@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3686: (2016-02-19 )
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDAGVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS

Atome Classification :

(94 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AP5_B_8(2ORI)
KAD_BACSU
[Raw transfer]




AP5_B_8(2QAJ)
KAD_BACSU
[Raw transfer]




AP5_B_8(2OO7)
KAD_BACSU
[Raw transfer]




AP5_A_5(4MKF)
KAD_BACSU
[Raw transfer]




AP5_A_3(1S3G)
KAD_SPOGL
[Raw transfer]




AP5_A_3(3HPQ)
KAD_ECOLI
[Raw transfer]




AP5_A_7(2OO7)
KAD_BACSU
[Raw transfer]




AP5_A_3(3BE4)
?
[Raw transfer]




AP5_A_4(2P3S)
KAD_BACSU
[Raw transfer]




AP5_B_8(4QBI)
KAD_GEOSE
[Raw transfer]




AP5_A_4(1P3J)
KAD_BACSU
[Raw transfer]




ADP_B_5(4JZK)
?
[Raw transfer]




AP5_B_4(1AKE)
KAD_ECOLI
[Raw transfer]




AP5_B_8(3DL0)
KAD_BACSU
[Raw transfer]




AP5_A_3(4QBH)
KAD_GEOSE
[Raw transfer]




AP5_B_4(1E4V)
KAD_ECOLI
[Raw transfer]




AP5_A_3(1AKE)
KAD_ECOLI
[Raw transfer]




AP5_A_7(2QAJ)
KAD_BACSU
[Raw transfer]




AP5_A_3(4QBF)
KAD_BACSU
[Raw transfer]




AP5_A_3(3BE4)
?
[Raw transfer]




AP5_A_3(1E4V)
KAD_ECOLI
[Raw transfer]




AP5_B_4(3HPQ)
KAD_ECOLI
[Raw transfer]




ATF_A_3(1DVR)
KAD2_YEAST
[Raw transfer]




AP5_A_3(1AKE)
KAD_ECOLI
[Raw transfer]




AP5_B_9(2EU8)
KAD_BACSU
[Raw transfer]




AP5_B_6(4X8O)
?
[Raw transfer]




AP5_A_4(4MKG)
KAD_BACSU
[Raw transfer]




AP5_B_8(2OSB)
KAD_BACSU
[Raw transfer]




AP5_B_6(4X8L)
?
[Raw transfer]




AP5_A_8(2EU8)
KAD_BACSU
[Raw transfer]




AP5_A_3(3FB4)
?
[Raw transfer]




AP5_A_7(2OSB)
KAD_BACSU
[Raw transfer]




AP5_A_4(1ZIP)
KAD_GEOSE
[Raw transfer]




AP5_B_4(3HPR)
KAD_ECOLI
[Raw transfer]




AP5_A_3(3HPR)
KAD_ECOLI
[Raw transfer]




ADP_B_6(2ECK)
KAD_ECOLI
[Raw transfer]




ADP_A_11(3TLX)
?
[Raw transfer]




ADP_A_11(3TLX)
?
[Raw transfer]




ADP_A_3(4JZK)
?
[Raw transfer]




AP5_A_7(2ORI)
KAD_BACSU
[Raw transfer]




ATF_B_4(1DVR)
KAD2_YEAST
[Raw transfer]




AP5_A_7(3DL0)
KAD_BACSU
[Raw transfer]




AP5_A_3(4X8O)
?
[Raw transfer]




AP5_B_11(4MKF)
KAD_BACSU
[Raw transfer]




AP5_A_3(4MKH)
KAD_BACSU
[Raw transfer]




AP5_B_6(4QBH)
KAD_GEOSE
[Raw transfer]




AP5_B_7(4TYQ)
KAD_BACSU
[Raw transfer]




ADP_A_4(4IKE)
KAD_AQUAE
[Raw transfer]




AP5_A_6(2RGX)
KAD_AQUAE
[Raw transfer]




AP5_A_3(1E4Y)
KAD_ECOLI
[Raw transfer]




AP5_B_9(3X2S)
?
[Raw transfer]




ADP_B_7(3SR0)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JL5)
KAD_AQUAE
[Raw transfer]




AP5_A_5(4QBI)
KAD_GEOSE
[Raw transfer]




AP5_A_9(4TYP)
KAD_BACSU
[Raw transfer]




AP5_B_7(4TYP)
KAD_BACSU
[Raw transfer]




ADP_A_2(4K46)
KAD_PHOPR
[Raw transfer]




AP5_A_5(3X2S)
?
[Raw transfer]




ADP_B_6(4JLB)
KAD_AQUAE
[Raw transfer]




AP5_A_3(1ZAK)
KADC_MAIZE
[Raw transfer]




ADP_B_6(4JLP)
KAD_AQUAE
[Raw transfer]




AP5_A_3(1ZIN)
KAD_GEOSE
[Raw transfer]




AP5_B_4(1E4Y)
KAD_ECOLI
[Raw transfer]




AP5_B_4(1ZAK)
KADC_MAIZE
[Raw transfer]




AP5_A_4(1ZIO)
KAD_GEOSE
[Raw transfer]




ANP_B_6(1ANK)
KAD_ECOLI
[Raw transfer]




AP5_A_3(4TYQ)
KAD_BACSU
[Raw transfer]




AP5_A_4(3DKV)
KAD_BACSU
[Raw transfer]




AP5_B_3(4QBG)
KAD_BACSU
[Raw transfer]




B4P_A_2(2C9Y)
KAD2_HUMAN
[Raw transfer]




ADP_B_6(4IKE)
KAD_AQUAE
[Raw transfer]




ADP_A_4(2CDN)
KAD_MYCTU
[Raw transfer]




ADP_A_4(4CF7)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4CF7)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JL8)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLA)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JLA)
KAD_AQUAE
[Raw transfer]




ADP_B_7(4JKY)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JL6)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLP)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JL8)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLO)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JLD)
KAD_AQUAE
[Raw transfer]




ADP_B_9(3TLX)
?
[Raw transfer]




ADP_A_4(4JLB)
KAD_AQUAE
[Raw transfer]




ADP_A_4(4JKY)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JL6)
KAD_AQUAE
[Raw transfer]




ADP_B_6(4JLO)
KAD_AQUAE
[Raw transfer]




AMP_B_5(1ANK)
KAD_ECOLI
[Raw transfer]




SRT_A_3(2XB4)
?
[Raw transfer]




AMP_A_5(2AK3)
KAD3_BOVIN
[Raw transfer]




AMP_B_6(2AK3)
KAD3_BOVIN
[Raw transfer]




PEG_C_11(4PZL)
KAD_FRATT
[Raw transfer]




1 PsiBlast_PDB 89.7964% -95 - C2 -4NP6 - KAD_VIBCH -
6 PsiBlast_PDB 88.7363% -88 - C2 -3HPQ 14.3 KAD_ECOLI
4 PsiBlast_PDB 88.7063% -86 - C2 -1AKE 13.8 KAD_ECOLI
22 PsiBlast_CBE 88.5663% -86 - C2 -3HPQ 14.0 KAD_ECOLI
7 PsiBlast_PDB 88.2063% -86 - C2 -4JZK 8.5 ?
8 PsiBlast_PDB 88.1662% -89 - C2 -4X8O 15.1 ?
25 PsiBlast_CBE 87.8863% -87 - C2 -1AKE 15.1 KAD_ECOLI
23 PsiBlast_CBE 87.6963% -87 - C2 -2ECK 7.9 KAD_ECOLI
26 PsiBlast_CBE 87.5462% -84 - C2 -4X8O 15.0 ?
2 PsiBlast_PDB 87.4364% -82 - C2 -4K46 9.0 KAD_PHOPR
5 PsiBlast_PDB 87.3463%-100 - C2 -4AKE - KAD_ECOLI -
9 PsiBlast_PDB 87.0562% -84 - C2 -3HPR 13.5 KAD_ECOLI
21 PsiBlast_CBE 87.0263% -84 - C2 -4JZK 9.1 ?
28 PsiBlast_CBE 86.9962% -86 - C2 -4X8L 14.3 ?
24 PsiBlast_CBE 86.3663% -85 - C2 -1ANK 8.6 KAD_ECOLI
10 PsiBlast_PDB 86.1862% -84 - C2 -1E4V 15.4 KAD_ECOLI
27 PsiBlast_CBE 85.2962% -86 - C2 -3HPR 13.1 KAD_ECOLI
30 PsiBlast_CBE 85.0062% -83 - C2 -3X2S 14.1 ?
29 PsiBlast_CBE 84.9462% -83 - C2 -1E4V 14.7 KAD_ECOLI
101 Fugue 84.3861% -84 - C2 -1AKE 13.8 KAD_ECOLI
113 HHSearch 84.2947% -94 - C2 -3BE4 14.4 ?
11 PsiBlast_PDB 84.2462% -84 - C2 -3X2S 13.3 ?
31 PsiBlast_CBE 82.9863% -85 - C2 -1E4Y 13.8 KAD_ECOLI
33 PsiBlast_CBE 82.8356% -93 - C2 -4PZL 2.7 KAD_FRATT
12 PsiBlast_PDB 81.7563% -86 - C2 -1E4Y 13.6 KAD_ECOLI
37 PsiBlast_CBE 78.9246% -97 - C2 -4QBI 14.8 KAD_GEOSE
36 PsiBlast_CBE 78.6446% -95 - C2 -4QBI 15.6 KAD_GEOSE
17 PsiBlast_PDB 76.2750%-102 - C2 -2C9Y 6.0 KAD2_HUMAN
35 PsiBlast_CBE 75.0951% -98 - C2 -1DVR 7.2 KAD2_YEAST
66 PsiBlast_CBE 75.0850% -84 - C2 -4MKF 14.6 KAD_BACSU
127 HHSearch 74.4942%-113 * C2 *2CDN 8.0 KAD_MYCTU
14 PsiBlast_PDB 73.9151% -82 - C2 -3BE4 14.6 ?
67 PsiBlast_CBE 73.8350% -85 - C2 -4MKF 15.2 KAD_BACSU
60 PsiBlast_CBE 73.5550% -80 - C2 -2OSB 14.3 KAD_BACSU
15 PsiBlast_PDB 73.2151% -92 - C2 -1DVR 7.9 KAD2_YEAST
18 PsiBlast_PDB 73.1252% -88 - C2 -3FB4 15.1 ?
59 PsiBlast_CBE 72.9050% -80 - C2 -2OO7 15.1 KAD_BACSU
49 PsiBlast_CBE 72.7751% -82 - C2 -2QAJ 14.5 KAD_BACSU
53 PsiBlast_CBE 72.1051% -80 - C2 -2P3S 14.0 KAD_BACSU
50 PsiBlast_CBE 72.0851% -83 - C2 -2QAJ 14.1 KAD_BACSU
58 PsiBlast_CBE 71.7550% -80 - C2 -2OO7 14.7 KAD_BACSU
55 PsiBlast_CBE 71.5251% -81 - C2 -2ORI 14.1 KAD_BACSU
112 HHSearch 71.1840% -90 - C2 -3TLX 7.1 ?
42 PsiBlast_CBE 70.6950% -81 - C2 -1ZIN 14.2 KAD_GEOSE
52 PsiBlast_CBE 70.6351% -80 - C2 -2EU8 14.1 KAD_BACSU
54 PsiBlast_CBE 70.5251% -79 - C2 -2ORI 14.4 KAD_BACSU
84 PsiBlast_CBE 70.4347% -90 - C2 -4IKE 8.5 KAD_AQUAE
56 PsiBlast_CBE 70.3650% -86 - C2 -4QBG 13.2 KAD_BACSU
71 PsiBlast_CBE 70.3447% -94 - C2 -4JLD 8.3 KAD_AQUAE
48 PsiBlast_CBE 70.3451% -76 - C2 -1P3J 14.4 KAD_BACSU
39 PsiBlast_CBE 70.3452% -87 - C2 -3DKV 14.4 KAD_BACSU
40 PsiBlast_CBE 70.2950% -85 - C2 -1ZIP 14.2 KAD_GEOSE
83 PsiBlast_CBE 70.2847%-101 - C2 -4IKE 6.2 KAD_AQUAE
61 PsiBlast_CBE 70.1850% -78 - C2 -2OSB 13.9 KAD_BACSU
80 PsiBlast_CBE 70.1647% -93 - C2 -4JL5 8.2 KAD_AQUAE
51 PsiBlast_CBE 70.0451% -78 - C2 -2EU8 14.5 KAD_BACSU
91 PsiBlast_CBE 70.0246% -97 - C2 -4JLO 7.7 KAD_AQUAE
89 PsiBlast_CBE 69.8846% -96 - C2 -4JLP 8.5 KAD_AQUAE
88 PsiBlast_CBE 69.8147% -92 - C2 -2RGX 13.5 KAD_AQUAE
41 PsiBlast_CBE 69.8150% -83 - C2 -1ZIO 13.7 KAD_GEOSE
73 PsiBlast_CBE 69.6747% -92 - C2 -4JLB 7.9 KAD_AQUAE
92 PsiBlast_CBE 69.6446% -95 - C2 -4JLO 7.3 KAD_AQUAE
45 PsiBlast_CBE 69.6351% -85 - C2 -3DL0 14.8 KAD_BACSU
86 PsiBlast_CBE 69.5947% -89 - C2 -4CF7 7.4 KAD_AQUAE
75 PsiBlast_CBE 69.4547% -92 - C2 -4JLA 7.5 KAD_AQUAE
78 PsiBlast_CBE 69.3947% -89 - C2 -4JL6 7.5 KAD_AQUAE
87 PsiBlast_CBE 69.2847% -91 - C2 -3SR0 7.9 KAD_AQUAE
93 PsiBlast_CBE 69.2445% -98 - C2 -2AK3 3.9 KAD3_BOVIN
44 PsiBlast_CBE 68.9951% -86 - C2 -3DL0 14.5 KAD_BACSU
43 PsiBlast_CBE 68.9552% -81 - C2 -4QBF 13.7 KAD_BACSU
94 PsiBlast_CBE 68.7845% -95 - C2 -2AK3 5.2 KAD3_BOVIN
38 PsiBlast_CBE 68.5752% -82 - C2 -4MKG 15.0 KAD_BACSU
118 HHSearch 68.4930% -92 - C2 -2XB4 2.4 ?
77 PsiBlast_CBE 68.4747% -89 - C2 -4JL8 8.2 KAD_AQUAE
90 PsiBlast_CBE 68.4446% -95 - C2 -4JLP 7.4 KAD_AQUAE
79 PsiBlast_CBE 68.4447% -91 - C2 -4JL6 7.5 KAD_AQUAE
82 PsiBlast_CBE 68.3547% -95 - C2 -4JKY 6.9 KAD_AQUAE
76 PsiBlast_CBE 68.3447% -93 - C2 -4JL8 9.1 KAD_AQUAE
74 PsiBlast_CBE 67.8647% -87 - C2 -4JLA 7.9 KAD_AQUAE
81 PsiBlast_CBE 67.8447% -92 - C2 -4JKY 7.4 KAD_AQUAE
85 PsiBlast_CBE 67.7047% -90 - C2 -4CF7 9.5 KAD_AQUAE
62 PsiBlast_CBE 67.6548% -86 - C2 -4TYQ 14.4 KAD_BACSU
72 PsiBlast_CBE 67.4647% -91 - C2 -4JLB 8.8 KAD_AQUAE
16 PsiBlast_PDB 67.2752% -87 - C2 -1S3G 14.0 KAD_SPOGL
65 PsiBlast_CBE 66.7050% -78 - C2 -4QBH 14.3 KAD_GEOSE
46 PsiBlast_CBE 66.6050% -84 - C2 -4TYP 12.1 KAD_BACSU
63 PsiBlast_CBE 66.5348% -88 - C2 -4TYQ 14.3 KAD_BACSU
47 PsiBlast_CBE 66.2150% -86 - C2 -4TYP 13.8 KAD_BACSU
57 PsiBlast_CBE 65.9650% -84 - C2 -4MKH 13.9 KAD_BACSU
68 PsiBlast_CBE 65.5044% -78 - C2 -3TLX 7.4 ?
64 PsiBlast_CBE 65.4350% -81 - C2 -4QBH 14.6 KAD_GEOSE
97 PsiBlast_CBE 65.0438% -88 - C2 -1ZAK 12.8 KADC_MAIZE
98 PsiBlast_CBE 64.7738% -89 - C2 -1ZAK 12.6 KADC_MAIZE
69 PsiBlast_CBE 64.4444% -75 - C2 -3TLX 7.4 ?