Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000804 (Helicobacter pylori - Dec 2015)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
200jhp_120719 96% 0.535 PF03070 C1_S137 - (14)4 - / - / 4 2
201jhp_044920 36% 0.404 PF13520 C4_S137 - (0)2 - / - / 3 1
202jhp_07666 96% 0.537 PF00076 37 - (0)? - / - / - 0
203jhp_14310 40% 0.287 PF11798 37 - (35)? - / - / - 0
204jhp_067319 35% 0.514 PF00266 C1_S137 - (28)2 - / - / 1 1
205jhp_00490 30% 0.018 PF00595 36 - (0)? - / - / - 0
206jhp_071120 42% 0.533 PF00579 C3_S136 - (27)10 - / 2 / 5 3
207jhp_098026 40% 0.513 PF00275 C8_S136 - (21)7 2 / 2 / 6 4
208jhp_128718 51% 0.599 PF00012 C1_S135 - (0)3 - / 3 / - 2
209jhp_103020 93% 0.562 PF00107 C1_S135 - (26)5 3 / - / 2 1
210jhp_146420 36% 0.384 PF00905 C1_S135 - (0)3 - / 1 / 1 2
211jhp_096519 42% 0.531 PF08003 C5_S135 - (0)2 - / 2 / - 1
212jhp_013020 43% 0.476 PF14815 35 - (0)? - / - / - 0
213jhp_061820 54% 0.656 PF01035 C4_S135 - (0)2 - / 2 / 3 0
214jhp_075020 47% 0.484 PF00899 34 - (18)? - / - / - 0
215jhp_086525 41% 0.418 PF01975 C10_S134 - (26)2 - / - / 2 0
216jhp_067520 96% 0.536 PF01820 C1_S134 - (24)1 - / - / 1 1
217jhp_09010 57% 0.320 PF00169 34 - (0)? - / - / - 0
218jhp_114319 29% 0.473 PF01565 34 - (27)? - / - / - 0
219jhp_129420 31% 0.478 PF03446 C2_S134 - (27)5 1 / 2 / 1 2
220jhp_143711 46% 0.541 PF00515 33 - (0)? - / - / - 0
221jhp_041517 32% 0.442 PF00398 33 - (0)? - / - / - 0
222jhp_067813 36% 0.330 PF01230 33 - (1)? - / - / - 0
223jhp_062810 42% 0.229 PF03104 33 - (29)? - / - / - 0
224jhp_059720 92% 0.549 PF00702 C1_S133 - (6)3 - / - / 1 0
225jhp_027011 30% 0.382 PF04055 33 - (6)? - / - / - 0
226jhp_137122 52% 0.452 PF13361 C4_S133 - (0)2 - / 2 / 3 1
227jhp_075820 38% 0.588 PF08402 33 - (0)? - / - / - 0
228jhp_026643 43% 0.595 PF01702 C4_S133 - (8)20 - / 5 / 20 19
229jhp_117431 53% 0.596 PF00579 C5_S132 - (24)11 6 / 1 / 6 3
230jhp_050536 50% 0.469 PF02801 C4_S132 - (9)19 - / 7 / 14 9
231jhp_11827 64% 0.327 PF01058 C1_S132 - (0)1 - / - / 1 0
232jhp_014134 65% 0.564 PF00154 C1_S132 - (0)11 - / 15 / 9 5
233jhp_099310 37% 0.483 PF08241 C1_S131 - (16)3 1 / 4 / - 2
234jhp_143319 34% 0.465 PF01513 31 - (27)? - / - / - 0
235jhp_093512 30% 0.397 PF01656 31 - (0)? - / - / - 0
236jhp_076120 46% ? PF03447 31 - (17)? - / - / - 0
237jhp_100015 43% 0.484 PF05175 C1_S131 - (0)5 - / 2 / 2 1
238jhp_114020 35% 0.588 PF02844 31 - (21)2 - / - / - 0
239jhp_120126 41% 0.590 PF00591 C2_S131 - (1)9 - / 4 / 8 5
240jhp_117814 99% 0.633 PF00156 31 - (17)? - / - / - 0
241jhp_001819 49% 0.607 PF00278 C3_S131 - (25)3 - / - / 3 0
242jhp_021814 24% 0.402 PF03738 31 - (20)? - / - / - 0
243jhp_055511 20% 0.026 PF01389 31 - (0)? - / - / - 0
244jhp_077111 95% 0.484 PF01596 31 - (25)? - / - / - 0
245jhp_044611 32% 0.436 PF08245 30 - (12)1 - / - / - 0
246jhp_102524 51% 0.659 PF01081 C1_S130 - (26)4 - / - / 5 2
247jhp_074317 31% 0.230 PF00593 30 - (0)? - / - / - 0
248jhp_054912 26% 0.611 PF00730 30 - (0)? - / - / - 0
249jhp_015034 51% 0.587 PF00490 C6_S130 - (18)14 - / - / 14 2
250jhp_081820 51% 0.491 PF01588 C1_S130 - (15)2 - / - / 1 0

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