Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
LTP (May 2014)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




 Query Sequence
Filter: 		Significants
SA found		 Seq Ident. 3D Core
(QMean Score)		 Modeller
(QMean Score)		 Classification code

 Binding Site (All) Ligands Found
(Procognate)		 Profile Complexes by comparative docking
(ligands from PDB templates)

 Targets
for screening


Sort by entries

 [Nb of SA]
 [Best Ident]
 [Best Score]
 [Best Score]
 Main Code
 [Name]
 [Number]
 [Number]
 Distribution of CDocking pKd
 [Number]
200412_tI_ZEADI8 98% 0.661 0.649 PF00234 C3_S14 - (0)- - / 1 / 3 -
201413_tI_ZEADI8 99% 0.614 0.603 PF00234 C2_S14 - (0)- - / 1 / 3 -
202421_tI_MAIZE8 88% 0.625 0.657 PF00234 C2_S14 - (0)- - / 2 / 2 -
203424_tI_MAIZE9 86% 0.643 0.643 PF00234 C3_S14 - (0)- - / 2 / 2 -
204434_tI_ZEAMP8 88% 0.625 0.657 PF00234 C2_S14 - (0)- - / 2 / 2 -
205046_tI_WHEAT9 58% 0.523 0.568 PF00234 C2_S12 - (0)- - / - / 1 -
206053_tI_WHEAT10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
207068_tI_ORYSA10 80% 0.631 0.577 PF00234 C2_S14 - (0)- - / 1 / 3 -
208003_tI_WHEAT10 86% 0.608 0.619 PF00234 C2_S14 - (0)- - / 1 / 3 -
209216_tI_BRANA8 56% 0.583 0.612 PF00234 C2_S12 - (0)- - / - / 2 -
210247_tI_GINBI8 44% 0.593 0.537 PF00234 C1_S12 - (0)- - / - / 1 -
211030_tI_WHEAT8 59% 0.581 0.586 PF00234 C1_S13 - (0)- - / - / 3 -
212354_tI_RICCO8 38% 0.595 0.553 PF00234 0 - (0)- - / - / - -
213373_tI_SETIT8 62% 0.484 0.484 PF00234 C2_S13 - (0)- - / - / 3 -
214041_tI_WHEAT8 40% 0.618 0.602 PF00234 0 - (0)- - / - / - -
215430_tI_ZEAMP8 86% 0.591 0.612 PF00234 C2_S14 - (0)- - / 2 / 2 -
216047_tI_WHEAT8 58% 0.455 0.570 PF00234 C2_S13 - (0)- - / - / 2 -
217069_tI_ORYSA9 64% 0.444 0.464 PF00234 C2_S14 - (0)- - / 2 / 2 -
218683_tI_BRADI8 56% 0.326 0.380 PF00234 C2_S12 - (0)- - / - / 2 -
219232_tI_CITJA8 68% 0.507 0.509 PF00234 C2_S14 - (0)- - / 1 / 3 -
220353_tI_RICCO9 39% 0.529 0.520 PF00234 0 - (0)- - / - / - -
221200_tI_ATRNU9 63% 0.578 0.578 PF00234 C2_S14 - (0)- - / 2 / 1 -
222312_tI_PICSI8 51% 0.650 0.621 PF00234 C2_S11 - (0)- - / - / 1 -
223362_tI_RICCO8 32% 0.564 0.572 PF00234 0 - (0)- - / - / - -
224316_tI_PICSI8 47% 0.627 0.648 PF00234 0 - (0)- - / - / - -
225158_tV_WHEAT11 33% 0.333 0.446 PF00234 0 - (0)- - / - / - -
226347_tI_RICCO10 36% 0.340 0.398 PF00234 0 - (0)- - / - / - -
227368_tI_SECCE10 64% 0.566 0.589 PF00234 C4_S12 - (0)- - / 1 / 1 -
228712_tV_SELMO9 31% 0.492 0.508 PF00234 0 - (0)- - / - / - -
229299_tI_TOBAC9 100% 0.548 0.588 PF00234 C4_S14 - (0)- - / 1 / 3 -
230477_tVI_POPTR10 26% 0.582 0.581 PF00234 0 - (0)- - / - / - -
231488_tVI_RICCO9 31% 0.580 0.566 PF00234 0 - (0)- - / - / - -
232502_tVI_SETIT10 40% 0.436 0.517 PF00234 0 - (0)- - / - / - -
233554_tIII_BRANA20 36% 0.533 0.533 PF00234 0 - (0)- - / - / - -
234583_tV_CICAR12 34% 0.424 0.388 PF00234 0 - (0)- - / - / - -
235586_tV_MAIZE11 34% 0.454 0.495 PF00234 0 - (0)- - / - / - -
236764_tV_VITVI11 29% 0.465 0.564 PF00234 0 - (0)- - / - / - -
237146_tIII_ARATH19 43% 0.757 0.759 PF00234 0 - (0)- - / - / - -
238183_tVIII_ORYSA8 31% 0.488 0.551 PF00234 0 - (0)- - / - / - -
239249_tI_GOSBA9 66% 0.487 0.548 PF00234 C2_S13 - (0)- - / - / 3 -
240250_tI_GOSHI9 66% 0.487 0.548 PF00234 C2_S13 - (0)- - / - / 3 -
241380_tI_SOLPN8 77% 0.577 0.587 PF00234 C4_S14 - (0)- - / 2 / 2 -
242503_tVI_BRANA9 29% 0.465 0.467 PF00234 0 - (0)- - / - / - -
243573_tIII_POPTR20 42% 0.654 0.720 PF00234 0 - (0)- - / - / - -
244574_tIII_RICCO19 40% 0.626 0.665 PF00234 0 - (0)- - / - / - -
245749_tVI_VITVI9 32% 0.444 0.465 PF00234 0 - (0)- - / - / - -
246790_tII_ARATH8 23% 0.346 0.483 PF00234 0 - (0)- - / - / - -
247147_tIII_ARATH19 41% 0.666 0.767 PF00234 0 - (0)- - / - / - -
248229_tI_CAPAN9 69% 0.544 0.549 PF00234 C3_S13 - (0)- - / - / 2 -
249372_tI_SESIN10 62% 0.555 0.556 PF00234 C3_S12 - (0)- - / - / 2 -
250375_tI_SOLCI8 74% 0.625 0.618 PF00234 C3_S14 - (0)- - / 2 / 2 -

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