Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000804 (Helicobacter pylori - Dec 2015)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
150jhp_077319 51% 0.525 PF01926 C3_S146 - (0)2 - / 5 / - 1
151jhp_079320 95% 0.553 PF01370 46 - (40)? - / - / - 0
152jhp_135425 49% 0.471 PF00034 C5_S146 - (35)6 15 / - / - 2
153jhp_143817 38% 0.462 PF00929 C1_S146 - (38)3 - / - / 1 1
154jhp_14094 34% 0.255 PF07952 46 - (12)? - / - / - 0
155jhp_056820 91% 0.541 PF00155 C1_S145 - (30)5 - / - / 3 2
156jhp_059120 97% 0.566 PF12804 C2_S145 - (28)4 - / 6 / 4 2
157jhp_017717 70% 0.507 PF13085 45 - (0)? - / - / - 0
158jhp_030425 45% 0.578 PF00625 C4_S145 - (32)6 - / 5 / 2 2
159jhp_053220 43% 0.512 PF14815 C1_S145 - (0)2 3 / 1 / - 0
160jhp_087622 35% 0.570 PF01168 C3_S145 - (34)5 - / 3 / 13 3
161jhp_002517 96% 0.545 PF02706 C3_S145 - (36)10 - / 5 / 4 5
162jhp_087520 54% 0.582 PF00072 C2_S145 - (0)2 - / - / 2 1
163jhp_061533 45% 0.586 PF00155 C1_S144 - (37)7 - / 1 / 24 2
164jhp_097419 42% 0.530 PF01568 44 - (14)? - / - / - 0
165jhp_06727 36% 0.357 PF00156 44 - (27)? - / - / - 0
166jhp_079219 40% 0.507 PF00294 C1_S144 - (25)5 - / 3 / 5 2
167jhp_131020 56% 0.547 PF01715 44 - (27)? - / - / - 0
168jhp_031414 50% 0.625 PF01656 C2_S143 - (0)4 - / 5 / - 0
169jhp_022113 31% 0.632 PF13442 43 - (0)? - / - / - 0
170jhp_016720 41% 0.436 PF00005 43 - (0)? - / - / - 0
171jhp_119844 48% 0.724 PF00290 C2_S143 - (23)20 - / 24 / 16 17
172jhp_117320 45% 0.532 PF00496 43 - (0)? - / - / - 0
173jhp_028728 37% 0.589 PF08402 C1_S142 - (0)5 - / 1 / 7 3
174jhp_098123 42% 0.598 PF02401 C6_S142 - (0)20 - / 1 / 37 14
175jhp_056020 51% 0.574 PF01336 C5_S142 - (30)6 - / 5 / 3 2
176jhp_087818 23% 0.487 PF01266 42 - (32)? - / - / - 0
177jhp_068545 39% 0.539 PF08402 C1_S141 - (0)12 - / 10 / 19 7
178jhp_062619 32% 0.254 PF00593 41 - (0)? - / - / - 0
179jhp_00947 35% 0.396 PF00535 41 - (22)? - / - / - 0
180jhp_000527 54% 0.677 PF00215 C2_S140 - (28)10 - / 13 / 3 3
181jhp_106712 39% 0.464 PF01656 C2_S140 - (0)3 - / 5 / 1 2
182jhp_109347 53% 0.545 PF00342 C5_S140 - (39)20 - / - / 39 11
183jhp_051920 52% 0.568 PF00156 C2_S140 - (30)6 - / 5 / 6 2
184jhp_067618 31% 0.554 PF12697 40 - (20)? - / - / - 0
185jhp_126545 48% 0.463 PF00044 C4_S139 - (30)4 10 / 14 / 2 2
186jhp_037718 63% 0.470 PF04760 C1_S139 - (0)3 - / 3 / 1 3
187jhp_037520 29% 0.427 PF00288 39 - (32)? - / - / - 0
188jhp_042724 39% 0.442 PF08402 C1_S139 - (0)5 - / - / 4 2
189jhp_08690 34% 0.594 PF13302 39 - (25)? - / - / - 0
190jhp_031014 93% 0.394 PF13302 C2_S139 - (0)2 - / 4 / - 1
191jhp_065520 48% 0.551 PF12170 39 - (0)0 - / - / - 0
192jhp_003022 100% 0.704 PF02261 C1_S139 - (6)2 3 / - / 2 2
193jhp_023522 37% 0.498 PF00005 C3_S138 - (0)5 - / - / 5 3
194jhp_081017 22% 0.190 PF00593 38 - (0)? - / - / - 0
195jhp_127329 96% 0.558 PF02749 C6_S138 - (21)8 - / - / 14 3
196jhp_116225 52% 0.396 PF07973 C3_S138 - (21)13 1 / 4 / 7 6
197jhp_135820 40% 0.519 PF00005 C1_S138 - (0)4 - / 7 / 1 2
198jhp_017025 50% 0.483 PF01336 C7_S138 - (24)12 - / 7 / 5 6
199jhp_014254 63% 0.611 PF03952 C1_S138 - (30)11 - / 3 / 26 6
200jhp_120719 96% 0.535 PF03070 C1_S137 - (14)4 - / - / 4 2

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