Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




 Query Sequence
Filter: 		Significants
SA found		 Seq Ident. 3D Core
(QMean Score)		 Classification code

 Binding Site Ligands Found
(Procognate)		 Profile Complexes by comparative docking
(ligands from PDB templates)

 Targets
for screening


Sort by entries

 [Nb of SA]
 [Best Ident]
 [Best Score]
 Main Code
 [Name]
 [Number]
 [Number]
 Distribution of CDocking pKd
 [Number]
250Lmo198420 44% 0.566 PF02776 C4_S173 - (28)12 9 / 2 / 8 3
251Lmo108620 69% 0.436 PF01128 C1_S134 - (26)6 - / 2 / 3 3
252Lmo049822 50% 0.598 PF02502 C11_S146 - (36)10 - / - / 6 3
253Lmo093123 45% 0.572 PF03099 C5_S134 - (21)12 3 / 2 / 10 3
254Lmo138817 44% 0.558 PF02608 C1_S117 - (0)3 - / 4 / 1 3
255Lmo015428 34% 0.493 PF00005 C1_S129 - (0)6 - / - / 11 3
256Lmo201821 31% 0.484 PF01678 C1_S111 - (4)5 - / - / 3 3
257Lmo131325 62% 0.568 PF00696 C1_S126 - (18)7 - / 3 / 4 3
258Lmo160513 35% 0.451 PF08245 C1_S132 - (17)3 2 / 1 / - 3
259Lmo242120 33% 0.579 PF00512 C2_S134 - (31)4 - / 5 / - 3
260Lmo076520 53% 0.491 PF01312 C3_S123 - (0)7 - / 2 / 6 3
261Lmo143420 51% 0.583 PF07521 C1_S120 - (0)4 2 / 2 / 3 3
262Lmo109219 63% 0.509 PF04095 C5_S129 - (5)8 - / - / 5 3
263Lmo222728 35% 0.579 PF00005 C1_S129 - (0)6 - / 4 / 5 3
264Lmo027915 51% 0.500 PF00317 C3_S110 - (7)3 - / - / 3 3
265Lmo099713 54% 0.594 PF01434 C3_S115 - (0)6 1 / 10 / - 3
266Lmo028620 43% 0.578 PF00155 C1_S140 - (26)6 - / - / 6 3
267Lmo271630 35% 0.408 PF00005 C2_S152 - (52)6 - / 3 / 6 3
268Lmo275919 51% 0.687 PF01661 C2_S139 - (0)7 2 / - / 4 3
269Lmo156723 45% 0.512 PF00285 C11_S115 - (11)7 - / 6 / 6 3
270Lmo221626 57% 0.496 PF01230 C5_S191 - (0)9 - / 1 / 4 3
271Lmo156593 61% 0.568 PF00476 C4_S1247 - (183)14 42 / 23 / 11 3
272Lmo098821 51% 0.538 PF03144 C1_S133 - (0)6 1 / 6 / 1 3
273Lmo097035 63% 0.622 PF00106 C3_S165 - (38)10 24 / 5 / 1 3
274Lmo153220 58% 0.588 PF05496 C3_S121 - (0)7 - / 10 / 5 3
275Lmo196513 36% 0.420 PF00293 C1_S120 - (12)5 - / - / 8 3
276Lmo209023 51% 0.493 PF00764 C4_S119 - (16)8 - / - / 5 3
277Lmo266223 55% 0.640 PF02502 C12_S146 - (35)11 - / - / 5 3
278Lmo023213 71% 0.725 PF10431 C2_S115 - (0)6 - / 11 / - 3
279Lmo107821 48% 0.529 PF00483 C1_S151 - (42)10 - / 11 / 2 3
280Lmo275153 48% 0.451 PF00005 C2_S151 - (49)6 - / 14 / 19 3
281Lmo123820 71% 0.573 PF03725 C2_S112 - (0)3 - / - / 3 3
282Lmo222919 100% 0.538 PF00905 C1_S123 - (0)3 - / - / 4 3
283Lmo265422 78% 0.518 PF03144 C2_S123 - (0)6 - / 7 / 7 3
284Lmo252625 100% 0.612 PF00275 C6_S126 - (14)6 1 / 3 / 4 3
285Lmo120723 42% 0.527 PF00005 C1_S117 - (0)7 - / - / 8 3
286Lmo284723 51% 0.601 PF00596 C4_S123 - (23)9 - / - / 11 3
287Lmo003220 31% 0.439 PF00480 C1_S133 - (25)4 - / - / 3 3
288Lmo022036 74% 0.623 PF09336 C4_S121 - (21)4 - / 14 / 5 3
289Lmo284020 33% 0.424 PF00128 C2_S146 - (13)11 - / - / 8 3
290Lmo187522 37% 0.491 PF00005 C1_S112 - (0)5 - / 2 / 5 3
291Lmo001127 51% 0.529 PF00288 C1_S151 - (25)13 - / 13 / 4 3
292Lmo031519 34% 0.707 PF03070 C2_S139 - (15)6 - / - / 10 3
293Lmo152423 55% 0.511 PF00156 C5_S139 - (29)9 - / 5 / 12 3
294Lmo176023 46% 0.668 PF01884 C3_S132 - (4)6 - / - / 7 3
295Lmo254115 45% 0.566 PF01300 C5_S113 - (0)3 1 / 1 / 2 3
296Lmo282423 36% 0.514 PF01842 C2_S145 - (36)7 2 / 2 / 3 3
297Lmo035930 37% 0.695 PF01116 C3_S117 - (13)4 - / - / 12 3
298Lmo201320 52% 0.488 PF01044 C2_S124 - (0)7 - / 2 / 6 3
299Lmo213921 39% 0.616 PF00005 C1_S111 - (0)6 - / 3 / 2 3
300Lmo084831 67% 0.642 PF08402 C1_S116 - (0)6 - / 5 / 4 3

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