Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000804 (Helicobacter pylori - Dec 2015)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




Query Sequence
Filter:
Significants
SA found
Seq Ident. 3D Core
(QMean Score)
Classification code

Binding Site Ligands Found
(Procognate)
Profile Complexes by comparative docking
(ligands from PDB templates)

Targets
for screening


Sort by entries

[Nb of SA]
[Best Ident]
[Best Score]
Main Code
[Name]
[Number]
[Number]
Distribution of CDocking pKd
[Number]
100jhp_071424 99% 0.626 PF00696 C1_S126 - (17)7 - / 3 / 4 3
101jhp_142821 54% 0.445 PF05222 C2_S169 - (68)7 4 / 4 / 3 2
102jhp_074036 55% 0.391 PF00926 C9_S124 - (0)7 - / - / 19 3
103jhp_120320 46% 0.451 PF00425 C1_S113 - (0)7 - / - / 4 1
104jhp_002231 46% 0.548 PF00285 C9_S115 - (11)7 - / 4 / 8 3
105jhp_034332 39% 0.441 PF00005 C3_S176 - (76)7 - / 9 / 6 4
106jhp_078226 49% 0.559 PF08543 C1_S168 - (53)7 - / - / 7 0
107jhp_014520 99% 0.694 PF01202 C2_S164 - (51)7 - / 2 / 4 3
108jhp_079030 79% 0.584 PF00478 C1_S155 - (40)7 - / 4 / 8 4
109jhp_098917 55% 0.452 PF07194 C3_S118 - (18)7 - / - / 13 4
110jhp_056125 39% 0.589 PF05191 C1_S183 - (68)7 3 / 2 / 5 4
111jhp_124522 63% 0.529 PF00206 C3_S117 - (10)7 - / - / 7 2
112jhp_141551 50% 0.524 PF03372 C1_S1121 - (2)7 - / 5 / 24 1
113jhp_061533 45% 0.586 PF00155 C1_S144 - (37)7 - / 1 / 24 2
114jhp_031318 49% 0.506 PF07991 C6_S128 - (19)7 - / 4 / 3 3
115jhp_077820 97% 0.463 PF02719 C1_S167 - (61)7 14 / 1 / 2 2
116jhp_054729 34% 0.317 PF00005 C2_S127 - (26)6 - / 11 / 2 4
117jhp_060720 51% 0.435 PF14622 C3_S122 - (0)6 - / - / 8 0
118jhp_073524 100% 0.455 PF00994 C5_S113 - (0)6 - / - / 5 2
119jhp_027524 97% 0.567 PF00278 C2_S129 - (22)6 - / 2 / 7 2
120jhp_010819 42% 0.429 PF01751 C4_S115 - (0)6 2 / - / 5 2
121jhp_024913 57% 0.604 PF10431 C4_S113 - (0)6 - / 11 / - 3
122jhp_108621 94% 0.566 PF02661 C8_S124 - (0)6 5 / 2 / 3 3
123jhp_149120 34% 0.476 PF00814 C4_S122 - (22)6 - / 6 / 1 3
124jhp_026844 40% 0.570 PF01202 C4_S165 - (62)6 5 / 16 / 14 2
125jhp_135425 49% 0.471 PF00034 C5_S146 - (35)6 15 / - / - 2
126jhp_110527 45% 0.570 PF01676 C6_S115 - (2)6 - / - / 7 3
127jhp_059323 47% 0.533 PF00275 C6_S120 - (13)6 - / 4 / 4 3
128jhp_038920 35% 0.541 PF02978 C6_S153 - (0)6 1 / 4 / 1 3
129jhp_148926 45% 0.573 PF03740 C10_S119 - (18)6 - / - / 10 3
130jhp_035324 39% 0.337 PF00702 C3_S117 - (0)6 - / 6 / 2 3
131jhp_142920 62% 0.594 PF00107 C1_S146 - (34)6 8 / - / - 2
132jhp_137326 49% 0.442 PF00587 C1_S126 - (24)6 - / 9 / 7 4
133jhp_056020 51% 0.574 PF01336 C5_S142 - (30)6 - / 5 / 3 2
134jhp_030425 45% 0.578 PF00625 C4_S145 - (32)6 - / 5 / 2 2
135jhp_104623 99% 0.611 PF01019 C1_S120 - (0)6 - / - / 2 0
136jhp_051920 52% 0.568 PF00156 C2_S140 - (30)6 - / 5 / 6 2
137jhp_003720 95% 0.647 PF00483 C2_S153 - (39)6 - / 4 / 1 2
138jhp_113321 45% 0.627 PF00132 C2_S1114 - (72)6 - / - / 13 1
139jhp_101521 91% 0.583 PF01041 C1_S150 - (29)6 - / - / 7 2
140jhp_016225 99% 0.662 PF01116 C5_S120 - (16)6 - / - / 15 4
141jhp_056717 54% 0.484 PF08245 C1_S130 - (19)6 3 / 3 / - 2
142jhp_076424 98% 0.605 PF07992 C3_S197 - (84)6 9 / 3 / 1 2
143jhp_032320 49% 0.541 PF00117 C2_S113 - (9)6 - / - / 5 3
144jhp_133445 48% 0.586 PF00160 C4_S1149 - (2)5 - / 18 / 4 2
145jhp_063824 53% 0.500 PF00108 C7_S117 - (8)5 - / 2 / 3 2
146jhp_100015 43% 0.484 PF05175 C1_S131 - (0)5 - / 2 / 2 1
147jhp_059431 56% 0.531 PF00206 C4_S117 - (10)5 - / - / 8 2
148jhp_028728 37% 0.589 PF08402 C1_S142 - (0)5 - / 1 / 7 3
149jhp_103020 93% 0.562 PF00107 C1_S135 - (26)5 3 / - / 2 1
150jhp_055122 46% 0.601 PF01208 C5_S113 - (10)5 8 / - / - 2

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