Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




 Query Sequence
Filter: 		Significants
SA found		 Seq Ident. 3D Core
(QMean Score)		 Classification code

 Binding Site Ligands Found
(Procognate)		 Profile Complexes by comparative docking
(ligands from PDB templates)

 Targets
for screening


Sort by entries

 [Nb of SA]
 [Best Ident]
 [Best Score]
 Main Code
 [Name]
 [Number]
 [Number]
 Distribution of CDocking pKd
 [Number]
250Lmo238523 50% 0.507 PF03061 C1_S132 - (0)8 - / - / 3 2
251Lmo180827 48% 0.590 PF00698 C1_S117 - (13)8 - / - / 6 2
252Lmo091720 47% 0.545 PF00232 C1_S145 - (29)8 - / - / 7 4
253Lmo195428 74% 0.587 PF01676 C5_S117 - (4)8 - / - / 9 3
254Lmo137236 39% 0.532 PF00676 C5_S133 - (23)8 - / 13 / 8 6
255Lmo000741 75% 0.570 PF00521 C3_S168 - (0)8 - / 2 / 25 0
256Lmo031729 50% 0.548 PF08543 C1_S178 - (59)8 - / 4 / 11 2
257Lmo116920 42% 0.580 PF00155 C1_S126 - (23)8 1 / 1 / 5 4
258Lmo019437 54% 0.575 PF08402 C1_S122 - (0)8 - / - / 16 4
259Lmo097930 48% 0.604 PF00005 C1_S137 - (0)8 - / 10 / 7 4
260Lmo120926 58% 0.490 PF01923 C6_S137 - (19)8 - / - / 19 3
261Lmo212636 54% 0.497 PF02903 C1_S141 - (0)8 - / 3 / 23 4
262Lmo110028 48% 0.383 PF00702 C3_S117 - (0)8 - / 3 / 7 3
263Lmo193330 100% 0.591 PF01227 C11_S123 - (0)8 - / - / 20 3
264Lmo060739 47% 0.488 PF00005 C2_S150 - (48)8 - / 14 / 6 4
265Lmo137821 48% 0.438 PF00512 C3_S136 - (29)8 2 / 12 / 1 4
266Lmo142137 43% 0.609 PF08402 C1_S138 - (0)8 - / 9 / 5 2
267Lmo128735 70% 0.516 PF00521 C2_S169 - (0)8 - / 1 / 29 0
268Lmo246019 54% 0.628 PF04198 C4_S123 - (11)8 - / 1 / 8 4
269Lmo151923 52% 0.515 PF01336 C8_S134 - (24)7 - / 4 / 6 3
270Lmo061122 55% 0.658 PF02525 C2_S166 - (41)7 - / 13 / 3 2
271Lmo275919 51% 0.687 PF01661 C2_S139 - (0)7 2 / - / 4 3
272Lmo151730 52% 0.585 PF00543 C8_S163 - (0)7 - / 2 / 9 3
273Lmo081020 95% 0.610 -C1_S145 - (0)7 - / - / 6 3
274Lmo234015 58% 0.658 PF04227 C4_S119 - (0)7 - / - / 5 3
275Lmo144121 82% 0.617 PF04551 C5_S113 - (0)7 - / - / 8 0
276Lmo159830 68% 0.543 PF00579 C4_S134 - (23)7 - / 9 / 9 4
277Lmo023120 31% 0.534 PF02807 C6_S122 - (21)7 - / - / 5 0
278Lmo201320 52% 0.488 PF01044 C2_S124 - (0)7 - / 2 / 6 3
279Lmo202324 35% 0.508 PF02910 C5_S141 - (37)7 5 / - / 3 4
280Lmo000923 70% 0.575 PF13302 C2_S140 - (0)7 - / 5 / 1 1
281Lmo069220 49% 0.471 PF07194 C1_S125 - (22)7 - / 6 / 7 4
282Lmo250020 46% 0.571 PF00512 C4_S133 - (28)7 2 / 12 / - 4
283Lmo197020 34% 0.506 PF02126 C3_S127 - (0)7 - / - / 2 1
284Lmo192420 40% 0.403 PF03446 C3_S128 - (22)7 13 / 4 / 2 3
285Lmo194722 42% 0.575 PF00512 C2_S141 - (38)7 - / 9 / 5 4
286Lmo036720 42% ? PF04261 C2_S135 - (0)7 5 / 1 / 1 2
287Lmo163822 99% 0.564 PF02016 C7_S141 - (0)7 - / - / 7 1
288Lmo242525 51% 0.724 PF01597 C4_S117 - (0)7 - / - / 1 0
289Lmo034520 47% 0.583 PF02502 C10_S122 - (0)7 - / - / 1 1
290Lmo068123 34% 0.607 PF02978 C7_S132 - (0)7 - / 3 / 6 2
291Lmo028819 54% 0.602 PF00512 C3_S134 - (24)7 2 / 5 / 2 4
292Lmo097422 50% 0.548 PF13193 C3_S158 - (33)7 - / 8 / 3 4
293Lmo023920 45% 0.509 PF01588 C3_S138 - (19)7 - / 3 / 3 2
294Lmo219237 35% 0.407 PF00005 C1_S127 - (0)7 - / 3 / 14 4
295Lmo190531 46% 0.583 PF01743 C1_S119 - (15)7 - / - / 16 3
296Lmo274729 57% 0.373 PF00587 C5_S133 - (32)7 - / 16 / 7 4
297Lmo076520 53% 0.491 PF01312 C3_S123 - (0)7 - / 2 / 6 3
298Lmo222522 56% 0.463 PF00206 C4_S117 - (10)7 - / - / 7 2
299Lmo153220 58% 0.588 PF05496 C3_S121 - (0)7 - / 10 / 5 3
300Lmo173931 45% 0.596 PF08402 C1_S124 - (0)7 - / 4 / 4 2

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