Atome 2 : Comparative Modeling, Annotation & Complexes Prediction of Study :
UP000000817 (Listeria monocytogenes- Mars 2016)

Download : Data.csv | 3D Models


Tab legend :
    Full name of ligand selected in the comparative docking column:

    General color information : Quality: [ Good | Correct | Uncertain ]
QueryStructural Alignment (SA)3D Modeling AnnotationLigands from PDB templatesPredicted Complexes - pKd:[ ‹nMol | ‹μMol | ‹mMol ]




 Query Sequence
Filter: 		Significants
SA found		 Seq Ident. 3D Core
(QMean Score)		 Classification code

 Binding Site Ligands Found
(Procognate)		 Profile Complexes by comparative docking
(ligands from PDB templates)

 Targets
for screening


Sort by entries

 [Nb of SA]
 [Best Ident]
 [Best Score]
 Main Code
 [Name]
 [Number]
 [Number]
 Distribution of CDocking pKd
 [Number]
1Lmo020391 46% 0.467 PF02868 C8_S1183 - (0)20 - / 18 / 40 38
2Lmo276171 40% 0.509 PF00232 C1_S184 - (64)20 - / 3 / 45 27
3Lmo030070 38% 0.519 PF00232 C3_S199 - (72)20 - / - / 48 25
4Lmo022461 59% 0.566 PF00809 C8_S171 - (28)20 - / 5 / 48 24
5Lmo027172 42% 0.573 PF00232 C2_S197 - (71)20 - / 2 / 46 23
6Lmo195380 54% 0.600 PF01048 C4_S181 - (43)20 - / 7 / 53 21
7Lmo269360 48% 0.616 PF01712 C3_S188 - (46)20 3 / 26 / 26 21
8Lmo057465 50% 0.520 PF00232 C4_S1103 - (77)20 - / - / 42 21
9Lmo108189 77% 0.650 PF00483 C1_S177 - (32)20 - / 7 / 77 20
10Lmo153050 51% 0.600 PF01702 C7_S138 - (13)20 - / 10 / 18 20
11Lmo131770 43% 0.520 PF13288 C2_S1122 - (55)20 26 / 16 / 28 19
12Lmo128661 71% 0.511 PF01751 C3_S156 - (0)20 5 / 26 / 14 18
13Lmo000663 72% 0.569 PF01751 C3_S161 - (0)20 5 / 30 / 13 18
14Lmo135746 68% 0.619 PF02786 C2_S171 - (34)20 1 / 15 / 27 18
15Lmo107263 99% 0.567 PF02786 C2_S158 - (25)20 1 / 20 / 21 18
16Lmo037263 44% 0.527 PF00232 C6_S1101 - (84)20 - / - / 35 17
17Lmo170948 66% 0.595 PF00557 C1_S174 - (1)20 - / - / 28 16
18Lmo185653 75% 0.598 PF01048 C1_S159 - (33)20 - / - / 42 15
19Lmo092249 46% 0.552 PF00485 C2_S1125 - (38)20 4 / 33 / 6 15
20Lmo175833 61% 0.535 PF03119 C4_S140 - (20)20 - / 18 / 15 14
21Lmo131555 57% 0.540 PF01255 C8_S1101 - (28)20 4 / 24 / 26 14
22Lmo096820 100% 0.509 PF01513 C1_S141 - (33)19 - / 7 / 12 14
23Lmo192958 63% 0.532 PF00334 C9_S157 - (53)20 - / 27 / 26 13
24Lmo149467 52% 0.665 PF01048 C1_S192 - (48)20 - / 40 / 15 13
25Lmo145160 36% 0.590 PF02401 C9_S1117 - (0)20 - / 2 / 74 13
26Lmo187369 47% 0.699 PF00186 C1_S1127 - (72)20 39 / 7 / 18 12
27Lmo158130 56% 0.637 PF00871 C3_S161 - (49)20 2 / 9 / 13 12
28Lmo197584 45% 0.514 PF11798 C3_S1327 - (297)20 - / 11 / 72 12
29Lmo237698 54% 0.567 PF00160 C7_S1152 - (5)20 - / 36 / 23 12
30Lmo122757 57% 0.620 PF03167 C8_S180 - (0)20 3 / 9 / 27 12
31Lmo039059 52% 0.714 PF03167 C8_S184 - (0)20 - / 7 / 32 12
32Lmo019851 55% 0.570 PF12804 C1_S159 - (41)19 - / 24 / 19 12
33Lmo022645 47% 0.565 PF01288 C8_S195 - (40)20 - / 6 / 27 12
34Lmo116829 53% 0.519 PF00871 C6_S151 - (42)20 2 / 8 / 14 12
35Lmo205271 63% 0.595 PF01467 C1_S1105 - (87)20 - / 25 / 45 11
36Lmo049145 58% 0.623 PF01487 C6_S151 - (36)20 - / - / 38 11
37Lmo187487 70% 0.657 PF00303 C7_S1123 - (89)20 - / 6 / 79 11
38Lmo021989 71% 0.583 PF00156 C2_S1115 - (48)20 1 / 32 / 39 10
39Lmo1901108 49% 0.547 PF02569 C5_S1326 - (236)20 7 / 47 / 32 10
40Lmo018463 68% 0.473 PF00128 C1_S199 - (0)20 - / - / 47 10
41Lmo158623 33% 0.373 PF01513 C4_S141 - (33)20 - / 7 / 16 10
42Lmo022371 73% 0.604 PF00291 C2_S181 - (54)20 - / 9 / 57 10
43Lmo122131 72% 0.487 PF01409 C3_S121 - (16)13 3 / 5 / 8 9
44Lmo086265 44% 0.513 PF00128 C1_S1144 - (45)20 - / - / 48 9
45Lmo026131 54% 0.556 PF00232 C1_S152 - (36)20 - / 1 / 17 9
46Lmo163140 41% 0.626 PF00591 C13_S173 - (1)20 - / 19 / 25 9
47Lmo220148 96% 0.519 PF02801 C2_S154 - (5)20 - / 7 / 16 9
48Lmo125455 47% 0.508 PF00128 C1_S178 - (0)20 - / - / 39 9
49Lmo136354 52% 0.535 PF00348 C1_S185 - (64)20 - / 1 / 41 9
50Lmo245852 73% 0.562 PF00162 C11_S181 - (71)18 - / 23 / 22 9

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